CN182062

Overview
NameCN182062
Unique NameCN182062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5726 contig Csv1_Contig5726:858..1491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30
Identity = 79/217 (36.41%), Postives = 118/217 (54.38%), Query Frame = 2
Query:    2 RHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKH--VRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS----SVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            + + +  +EE        +   ++ T +S+ +TN  TCL+  S    N    V+  L D         +  ++++    D  M+I    +NR           +P+WL+  DR+LL+SS     VT N VVA DG+G FKT        P+    RY+I +K GVY+E +++ KK KN+M +GDG+  TIITGS NV+DGSTTF+SATVA  G+GF+
Sbjct:  134 KDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMII----SNR-----------FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFM 335          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30
Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = 2
Query:    2 RHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS--SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            + + V+ +    ++   ++  +DL   +S  +TN  TCLDG      +            +++ +  + L  +     T + I  T    K          +P W++ GDRRLLQ+    + P+ VVA DGSG+++T        P    KR I+ ++ G+Y ENV+   + KN+M +G+G   TIITGSRNVVDGSTTF SATVA VG+GF+
Sbjct:  121 KERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTD------------YIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIEPVTGNFPTWVTAGDRRLLQTLGKDIEPDIVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFI 321          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30
Identity = 81/204 (39.71%), Postives = 119/204 (58.33%), Query Frame = 2
Query:   38 NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNA---LAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS--VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +K+S S+HA+  ++ +S  +TN  TCLD    D   K    A+ +G  ++E++ S A   LAM+ ++T  D  +  T            +   P+W+S  DR+L++SS   +  NAVVA DG+G+++T        P     RY+I +K G Y+ENVEV     N+M +GDG   T ITGS NVVDGSTTF+SAT+A VG+GF+
Sbjct:  138 DKRSRSEHAN-AQSWLSGVLTNHVTCLDEL--DSFTK----AMING-TNLEELISRAKVALAMLASLTTQDEDVFMT-----------VLGKMPSWVSSMDRKLMESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFI 322          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30
Identity = 82/192 (42.71%), Postives = 109/192 (56.77%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIK---NMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D +T +S A+TN  TC  GF        V   +S+   +V  +  N LA+ K   N T  +                   DG+P+W+ PGDR+LLQSS+   NAVVA DGSGNFKT           G+ R++I +K GVY EN+E+ K  KN+M  GDG  +TIITGS++V  G+TTF SATVA VG+GF+
Sbjct:  125 DAQTWLSTALTNLDTCRAGFLELGVTDIVLPLMSN---NVSNLLCNTLAINKVPFNYTPPEK------------------DGFPSWVKPGDRKLLQSSTPKDNAVVAKDGSGNFKT--IKEAIDAASGSGRFVIYVKQGVYSENLEIRK--KNVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFI 291          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 2
Query:   47 SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            S  + + DL+T +SAA+ NQ TC +GF  +  N  V+  +S G   V  +    L  +   ++      +   N ++          P+W+   DR+LLQ+  V+ +A+VA DG+GNF          P    +RY+I IK G Y+ENVE+ KK  N+M IGDG   TII+G+R+ VDG TTF+SAT AV G GF+
Sbjct:  120 STGKLSSDLRTWLSAALVNQDTCSNGF--EGTNSIVQGLISAGLGQVTSLVQELLTQVHPNSN------QQGPNGQI----------PSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFI 297          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29
Identity = 81/204 (39.71%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   38 NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNA---LAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS--VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +K+S S+HA+  ++ +S  +TN  TCLD    D   K    A+ +G  +++++ S A   LAM+ ++T  +  ++R    +            P+W+S  DR+L++SS   +  NAVVA DG+G ++T        P     RY+I +K G Y+ENVEV+ +  N+M IGDG   TIITGS NVVDGSTTF SAT+A VG+GF+
Sbjct:  142 DKRSRSEHAN-AQSWLSGVLTNHVTCLDEL--DSFTK----AMING-TNLDELISRAKVALAMLASVTTPNDEVLRPGLGKM-----------PSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFI 326          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29
Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 2
Query:   47 SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVT---PNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            S  +   DL++ +SA M+ Q TCLDGF   +    V+ +++  QV    + SN+LA+IK  T+    +M+         E   +DG P+W+S  DRR+L++  V    PNA VA DGSG+F T        P+    RYII +K G+Y E V V KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+
Sbjct:  203 SFEKVVPDLESWLSAVMSYQETCLDGFEEGNLKSEVKTSVNSSQV----LTSNSLALIKTFTENLSPVMKVV-------ERHLLDGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFM 390          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.558e-29
Identity = 77/195 (39.49%), Postives = 112/195 (57.44%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSH-DDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKL--TEETSTVDGWPAWLSPGDRRLL--QSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRE-NVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D+ T +S+AMTN  TC DGF   +     V+D +      + +M SN LA+       D+  +   NNRKL  TEET  +   P WL   DR LL   +S++  +  V+ DGSG FKT        P+  ++R++I +KAG Y E N++V +K  N+MFIGDG+ +T+ITG +++ D  TTF +AT A  G GF+
Sbjct:  173 DVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVK-DLSGVPVVNNRKLLGTEETEEL---PNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFI 363          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.340e-29
Identity = 78/214 (36.45%), Postives = 118/214 (55.14%), Query Frame = 2
Query:    5 HKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDD--ANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMR--TSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            HK+V  L+++   K LS++A DLK  ++  +++Q TCLDGF++    A + +   L        ++ SNA+    +M D    I++   ++   ++    + DG P+W++ G RRLL   +V PNAVVA DGSG FKT        P      ++I +KAGVY+E V V K+   +  IGDG T+T  TGS N  DG  T+ +AT  V G  F+
Sbjct:   16 HKSVGTLDQFDFHK-LSEYAFDLKVWLTGTLSHQQTCLDGFANTTTKAGETMTKVLKTSM----ELSSNAI----DMMDAVSRILKGFDTSQYSVSRRLLSDDGIPSWVNDGHRRLLAGGNVQPNAVVAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFM 220          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.828e-28
Identity = 77/204 (37.75%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   38 NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNA---LAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS--VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +K++ S+HA+  ++ +S  +TN  TCLD    D   K    A+ +G  +++++ S A   LAM+ ++T  +  ++R    +            P+W+S  DR+L++SS   +  NAVVA DG+G ++T        P     RY+I +K G+Y+ENVEV+ +   +M +GDG   TIITG+ NVVDGSTTF SAT+A VG+GF+
Sbjct:  142 DKRTHSEHAN-AQSWLSGVLTNHVTCLDEL--DSFTK----AMING-TNLDELISRAKVALAMLASVTTPNDDVLRPGLGKM-----------PSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFI 326          
The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME18_ARATH1.771e-3036.41Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME1_FICAW5.153e-3034.27Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME1_SOLLC8.790e-3039.71Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME17_ARATH8.790e-3042.71Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_PRUPE1.148e-2938.27Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME21_SOLLC1.148e-2939.71Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME13_ARATH1.958e-2937.69Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME61_ARATH2.558e-2939.49Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_MEDSA3.340e-2936.45Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME22_SOLLC2.828e-2837.75Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bp
GAGGCACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTT
TATCACAGCATGCGGATGATCTCAAAACCTTAATGAGTGCCGCGATGACC
AATCAGGGGACGTGTCTTGATGGGTTCTCGCATGATGATGCTAATAAGCA
CGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTA
GCAATGCGCTTGCTATGATCAAGAACATGACGGACACTGACATGATGATC
ATGAGGACTTCAAACAACAGGAAGCTGACAGAGGAGACCAGTACGGTTGA
TGGGTGGCCGGCGTGGCTGTCCCCCGGCGACAGGAGGCTGTTGCAGTCCT
CGTCGGTGACACCGAACGCGGTGGTGGCGGCAGATGGCAGCGGAAACTTT
AAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAGCG
GTATATTATTAGGATTAAAGCTGGTGTTTATCGGGAAAATGTTGAGGTGA
CAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGAAGGACTAGAACT
ATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTC
TGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
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