CN182062

Overview
NameCN182062
Unique NameCN182062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5726 contig Csv1_Contig5726:858..1491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.300e-28
Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 2
Query:   38 NKKSLSQHADDLKTLMSAAMTNQGTCLD---GFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS--VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +K+S S+HA+  ++ +S  +TN  TCLD    FS    N  V D L             ALAM+ ++T  +  ++R    +            P W+S  DR+L++SS   +  N VVA DG+G+++T        P     RY+I +K G+Y+ENV VTKK  N+M +GDG   TIITGS NVVDGS TF S T+A VG+GF+
Sbjct:  137 DKRSRSEHAN-AQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELIT-------RAKVALAMLASVTTPNDEVLRQGLGKM-----------PYWVSSRDRKLMESSGKDIIANRVVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGS-TFPSNTLAAVGQGFI 320          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.403e-27
Identity = 69/199 (34.67%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   47 SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS--SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYREN-VEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            S S    D+ T +SAA+TN  TC +GF   D +  V+D ++    ++ ++ SN LA+     D D        NR+L       + +P W+ P +R +L+   S +  + +V+ DG+G  KT        PQ  T+R II +KAG Y EN ++V +K  N+MF+GDG+ +T+I+G +++ D  TTF +A+ A  G GF+
Sbjct:  177 SSSAKPQDVTTWLSAALTNHDTCTEGFDGVD-DGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFI 374          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.833e-27
Identity = 76/209 (36.36%), Postives = 111/209 (53.11%), Query Frame = 2
Query:   44 KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKH----------VRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS--SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +S S    ++K L+SAAMTN  TCLDGF+  D +++          V ++L +   ++    S++LAM++N+              K+ E+     G+P W+S  DR LLQ        N VVA +G+GN+ T        P     R++I IK G Y EN+E+ ++   IMFIGDG  RT+I  +R+  DG T F SATV V G GF+
Sbjct:  100 RSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPG--------HIPGKVKEDV----GFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFI 296          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27
Identity = 70/194 (36.08%), Postives = 114/194 (58.76%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTD-TDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS----SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +L+  +SAA++++ TCL+GF     N    + +        ++  N LA+I  M++    M +   N+R+L  E     G+P+W+    R+LLQ+    S V P+ VVA DGSG +KT        P+     +++ IKAG+Y+E V+V K   +++FIGDG  +TII+G++N  DG TT+++ATVA+VG  F+
Sbjct:  158 NLRIWLSAAISHEETCLEGFQGTQGN--AGETMKKALKTAIELTHNGLAIISEMSNFVGQMQIPGLNSRRLLAE-----GFPSWVDQRGRKLLQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFI 344          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.126e-27
Identity = 75/211 (35.55%), Postives = 115/211 (54.50%), Query Frame = 2
Query:   14 VEDLEE-YPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVD-GWPAWLSPGDRRLLQS--SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            + DLE    + +S S   +D+  L++  MT Q TCLDGFS  D   +     +D    + +     +  I N     + +++  + +K + ++S VD  +P+WLS  D+RLL++       N  VA DG+GNF T        P     R+II IK G Y ENVE+ KK   IMFIGDG  +T+I  +R+ +DG +TF++ TV V G+G++
Sbjct:  105 ISDLETAVSDLRSSSLEFNDISMLLTNVMTYQDTCLDGFSTSDNENN-----NDMTYELPENLKEIILDISNNLSNSLHMLQVISRKKPSPKSSEVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYI 310          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.126e-27
Identity = 73/215 (33.95%), Postives = 126/215 (58.60%), Query Frame = 2
Query:    8 KAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGF--SHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDT--DMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS--SSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            K+ E+L ++   K + +    L+  +SA ++++ TCLDGF  +  +A + ++ AL        ++  N LAM+  M++    M I   ++ R L++E      +P+W+    RRLL +  S V P+ VVA DGSG +KT        P+     +++ IK G+Y+E V+V +   +++FIGDG  +T+I+GS++  DG TT+K+ATVA+VG+ F+
Sbjct:  138 KSFEELGKFEFHK-VDEALVKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAV----QLTHNGLAMVTEMSNYLGQMQIPEMNSRRLLSQE------FPSWMDARARRLLNAPMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFI 341          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26
Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIM--------RTSNNRKL--TEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D +T +SAA++NQ TC++GF  D  +  V+  ++     +  M    L +++       +          +    RKL  T+E  ++  +P W+ P DR+LL+S+  T +  VA DG+GNF          P   + R++I IK G+Y ENVE+ KK  NI+ +GDG   T+I+G+R+ +DG TTF+SAT AV G GFL
Sbjct:  106 DTRTWLSAALSNQATCMEGF--DGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQ-FPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSGRGFL 301          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.647e-26
Identity = 68/198 (34.34%), Postives = 110/198 (55.56%), Query Frame = 2
Query:   53 SQHADDLKTLMSAAMTNQGTCLD--GFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQ--SSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            S    +++T +SAA+T+Q TCLD  G  +  A +     +     +  +  SN+LA++  +           ++R+L        G+P WL   +RRLL+  ++  TP+AVVA DGSG FKT         +   +R+ + +K G Y EN+++ K   N+M  GDG+ +T + GSRN +DG+ TF++AT AV G+GF+
Sbjct:  172 SASVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHHRRLL-------GFPEWLGAAERRLLEEKNNDSTPDAVVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFI 362          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.006e-25
Identity = 80/222 (36.04%), Postives = 120/222 (54.05%), Query Frame = 2
Query:   38 NKKSLSQHAD--DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVH--VEKMCSNALAMIKNMTDTDMMIMR--TSNNRKLTEETSTVDG-------------WPAWLSPGDRRLLQSSSVTPNA--VVAADGSGNFKTXXXXXXXXPQ--GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +++S  Q++   D +T +SAA+ NQ TC +GF  D             Q H  + K  SN+LA+ K   + + +  +  ++   K +++ S+  G             +P+W    DR+LL+ S  T  A  VVA DGSG++ +         +     +R +I +KAGVYRENV + K  KN+M IGDG   TI+TG+RNV DG+TTF+SAT AV G GF+
Sbjct:  121 SRRSYGQYSSPHDRQTSLSAAIANQDTCRNGF-RDFKLTSSYSKYFPVQFHRNLTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFI 341          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.006e-25
Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 2
Query:   65 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS--SVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            DD+ T +SAA+TNQ TC    S   +      A+     ++  + +N+L M  +           +  RKL  +      +P W+S  DR+LL++S   + P+AVVAADGSG   +         +G + R +I + AG Y+EN+ +  K KN+M +GDG+ +T+I GSR+   G  T++SATVA +G+GF+
Sbjct:  130 DDVHTWLSAALTNQETCKQSLSEKSSFNKEGIAIDSFARNLTGLLTNSLDMFVSDKQKSSSSSNLTGGRKLLSDHD----FPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEKG-SGRSVIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFI 316          
The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME3_SOLLC6.300e-2839.22Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME34_ARATH1.403e-2734.67Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME40_ARATH1.833e-2736.36Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_ARATH2.394e-2736.08Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME39_ARATH3.126e-2735.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME28_ARATH3.126e-2733.95Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME44_ARATH1.188e-2636.18Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU2.647e-2634.34Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME6_ARATH1.006e-2536.04Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME35_ARATH1.006e-2534.90Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bp
GAGGCACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTT
TATCACAGCATGCGGATGATCTCAAAACCTTAATGAGTGCCGCGATGACC
AATCAGGGGACGTGTCTTGATGGGTTCTCGCATGATGATGCTAATAAGCA
CGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTA
GCAATGCGCTTGCTATGATCAAGAACATGACGGACACTGACATGATGATC
ATGAGGACTTCAAACAACAGGAAGCTGACAGAGGAGACCAGTACGGTTGA
TGGGTGGCCGGCGTGGCTGTCCCCCGGCGACAGGAGGCTGTTGCAGTCCT
CGTCGGTGACACCGAACGCGGTGGTGGCGGCAGATGGCAGCGGAAACTTT
AAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAGCG
GTATATTATTAGGATTAAAGCTGGTGTTTATCGGGAAAATGTTGAGGTGA
CAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGAAGGACTAGAACT
ATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTC
TGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
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