CN182062

Overview
NameCN182062
Unique NameCN182062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5726 contig Csv1_Contig5726:858..1491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25
Identity = 74/195 (37.95%), Postives = 104/195 (53.33%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTV---DGWPAWLSPGDRRLLQSSSVT---PNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            DL + +SA M+ Q TC+DGF        +R   +  QV    + SN+LAMIK++ D  +  +     R L E  S+    D   +WLS  +RR+L++  V    PNA VA DGSGNF T        P     RY I IK G+Y E+V + KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+
Sbjct:  196 DLDSWLSAVMSYQETCVDGFEEGKLKTEIRKNFNSSQV----LTSNSLAMIKSL-DGYLSSVPKVKTRLLLEARSSAKETDHITSWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFM 385          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25
Identity = 69/216 (31.94%), Postives = 113/216 (52.31%), Query Frame = 2
Query:   14 VEDLEEYPNKKSLSQHA-DDLKTLMSAAMTNQGTCLDGFSH------DDANKHVRDALSDGQVHVEKMCSNALAMIKNMTD--TDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            V  +++   KK+LS    +DLKT +SA +T+  TC D          + AN  +   L        +  SN+LA++  +    +D+ I      R ++        +  W     RRLLQ++ + P+  VA DG+G+  T        P+   K ++I +K+G Y ENV + K   N+M  GDG+ +TII+GS+N VDG+ T+++AT A+ G+GF+
Sbjct:  157 VSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWAR---RRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFI 369          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24
Identity = 70/200 (35.00%), Postives = 107/200 (53.50%), Query Frame = 2
Query:   50 LSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDT----DMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS-VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATVAVVGEGF 631
            +    +DL+  +S ++  Q TC+D F  ++ N  +   +        ++ SN LAMI N+++     ++  +     +   +  S  DG P+W+ P  RRL+ +   V  N VVA DGSG +KT        P+   K ++I IK GVY E V+VTKK  ++ FIGDG T+T ITGS N   G   T+ +ATVA+ G+ F
Sbjct:  151 IEDFVEDLRVWLSGSIAYQQTCMDTF--EETNSKLSQDMQKIFKTSRELTSNGLAMITNISNLLGEFNVTGVTGDLGKYARKLLSAEDGIPSWVGPNTRRLMATKGGVKANVVVAHDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNF 348          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24
Identity = 76/202 (37.62%), Postives = 108/202 (53.47%), Query Frame = 2
Query:   53 SQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNAL-AMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS-------VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            S+   D +  +SAA+TN+ TCL+G   + A+  ++  L        K  SN+L A+ K    T+      + NR+L      +  +P W+   D R L+ SS        + + VVAADG+GNF T        P     R +I +K GVY EN+++     NI+ IGDG   T ITG+R+V DG TTF+SAT+AV GEGFL
Sbjct:  133 SRKLADARAYLSAALTNKITCLEGL--ESASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRL------LGLFPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFL 326          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.606e-23
Identity = 74/203 (36.45%), Postives = 108/203 (53.20%), Query Frame = 2
Query:   65 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLT--------EETSTVDGWPAWLSPGDRRLLQSSSVTP-----NAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATVAVVGEGF 631
            +DL+  +S ++  Q TC+D F    +N  ++D L   +   E + SN+LAM+  ++     ++  SN   LT        +  ST D  P W+ P  RRL+ +    P     NAVVA DG+G FKT        P+G    +II IK G+Y+E V VTKK  ++ FIGDG  +T+ITGS N   G   TF +AT+ + G+ F
Sbjct:  150 EDLRVWLSGSIAFQQTCMDSFGEIKSNL-MQDMLKIFKTSRE-LSSNSLAMVTRIST----LIPNSNLTGLTGALAKYARKLLSTEDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHF 346          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.577e-23
Identity = 75/196 (38.27%), Postives = 110/196 (56.12%), Query Frame = 2
Query:   65 DDLKTLMSAAMTNQGTCLDGFSHDD---ANKHVRDALSDGQVHVEKMCSNALAMIKNMTD-TDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNA--VVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            DDL+T +S+A T Q TC++  + D       H++++         ++ SNALA+I  +    D   +R    R LT     VD          RRLLQS+ +   A  VVA DGSG ++T        P+   KR II +K GVY ENV+V KK  N++ +GDG +++I++G  NV+DG+ TFK+AT AV G+GF+
Sbjct:  166 DDLRTWLSSAGTYQRTCVETLAPDMRPFGESHLKNST--------ELTSNALAIITWLGKIADSFKLR---RRLLTTADVEVD------FHAGRRLLQSTDLRKVADIVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFM 344          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23
Identity = 68/191 (35.60%), Postives = 101/191 (52.88%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTK--RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D +T +S A+TN  TC  G S  + +      +S+ ++    + SN LA+       +  ++    N   T ++    G+P W+S  +RRLLQ  SV  N VVA DGSG+FKT         +      R++I +K G+Y+EN+ V   + NIM +GDG   TIITG R+V  G TT+ SAT  + G  F+
Sbjct:  138 DAQTWLSTALTNTETCRRGSSDLNVSDFTTPIVSNTKI--SHLISNCLAV-------NGALLTAGKNDSTTGDSK---GFPTWVSRKERRLLQLQSVRANLVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFI 316          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22
Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 2
Query:   11 AVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQV-HVEKMCSNALAMIK---NMTDTDMM----IMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNA--VVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            AV+ L E     S  ++ DDL+T +S+  T Q TC+D     +ANK       +  + +  +M SNALA+I     + DT       ++ T N + +  +   ++G         RRLL+S  +   A  VVA DGSG ++T         +   K  II +K GVY ENV V K   N++ +GDG+++TI++   N +DG+ TF++AT AV G+GF+
Sbjct:  142 AVDQLNE--TMTSSLKNFDDLRTWLSSVGTYQETCMDALV--EANKPSLTTFGENHLKNSTEMTSNALAIITWLGKIADTVKFRRRRLLETGNAKVVVADLPMMEG---------RRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFM 346          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.151e-21
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  203 NALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            NAL+M+ +  D  M+   T  NRKL    S+            RRLLQ S+  PNA VA DGSG +KT        P+  T+ +II IKAGVY+E +++ K   N++ IG+G T+T ITG+++V DG +TF + TV V G  F+
Sbjct:   14 NALSMLNSFGD--MVAQATGLNRKLLTTDSS--------DATARRLLQISNAKPNATVALDGSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFV 147          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21
Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTK--RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D +T +S A+TN  TC  G S  +    +   +S+ ++    + SN LA+   +         T+ N+  T  T+   G+P WLS  D+RLL++  V  N VVA DGSG+F T         +      R++I +K G+Y+EN+ V   + +IM +GDG   TIITG R+V  G TT+ SAT  + G  F+
Sbjct:  136 DAQTWLSTALTNTETCRRGSSDLNVTDFITPIVSNTKI--SHLISNCLAVNGALL--------TAGNKGNT--TANQKGFPTWLSRKDKRLLRA--VRANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFI 312          
The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME45_ARATH1.716e-2537.95Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME1_ARATH3.822e-2531.94Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME58_ARATH1.112e-2435.00Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME12_ARATH1.112e-2437.62Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME23_ARATH1.606e-2336.45Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME24_ARATH3.577e-2338.27Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME60_ARATH7.969e-2335.60Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME46_ARATH3.028e-2233.94Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_PETIN1.151e-2141.67Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME59_ARATH7.459e-2135.08Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bp
GAGGCACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTT
TATCACAGCATGCGGATGATCTCAAAACCTTAATGAGTGCCGCGATGACC
AATCAGGGGACGTGTCTTGATGGGTTCTCGCATGATGATGCTAATAAGCA
CGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTA
GCAATGCGCTTGCTATGATCAAGAACATGACGGACACTGACATGATGATC
ATGAGGACTTCAAACAACAGGAAGCTGACAGAGGAGACCAGTACGGTTGA
TGGGTGGCCGGCGTGGCTGTCCCCCGGCGACAGGAGGCTGTTGCAGTCCT
CGTCGGTGACACCGAACGCGGTGGTGGCGGCAGATGGCAGCGGAAACTTT
AAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAGCG
GTATATTATTAGGATTAAAGCTGGTGTTTATCGGGAAAATGTTGAGGTGA
CAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGAAGGACTAGAACT
ATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTC
TGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
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