CN182062

Overview
NameCN182062
Unique NameCN182062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 74/250 (29.60%), Postives = 114/250 (45.60%), Query Frame = 2
Query:    8 KAVEDLEEYPNKKSLS-QHADDLKTLMSAAMTNQGTCLDGFSHD---DANKHVRDALSDGQVHVEKMCSNALAMI-------------------KNMTDTDMMIMRTSNNR----KLTEETSTVDGWPAWLSPGDRRLLQSSS-----------VTPNAVVAADGSGNFKTXXXXXXXXPQ---GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            + V D     + K LS   ADD++TL+SAA+TN+ TCL+G +      A   VR  ++   V+  K+   +LA+                    ++ + T     R   N     K+TE+T  V     + S   R+L    S           ++    V+ DG+GNF          P    G    ++I + AG+Y E + + K  + +M IGDG  +T++TG+R+VVDG TTF SAT AV    F+
Sbjct:  112 ETVNDTSAKTSFKPLSFPKADDIQTLLSAALTNEQTCLEGLTTAASYSATWTVRTGVALPLVNDTKLLGVSLALFTKGWVPKKKKRAGFAWAQPRSGSSTHTKPFRLFRNGALPLKMTEKTKAV-----YESLSRRKLADGDSNGDGDDGSMVLISDIVTVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFV 356          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 56/197 (28.43%), Postives = 92/197 (46.70%), Query Frame = 2
Query:   44 KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            + + +  ++  T +S+ +T+  TC+D        + V   L       E + S A  ++       +        R  TE  S +   P+WL   D++ L  ++   + VVA DG+G + T        PQ   KR++I IK G+Y E V +     N+  IGDG+  TIITG+ +  +   T+ +ATVA  G GF+
Sbjct:   96 EEMMESEENSHTWLSSVLTSYITCIDEIGEGAYKRRVEPKL-------ENLISRARVVLALFISISL--------RDNTELISVIPNGPSWLFHVDKKDLYLNAEIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFI 277          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 68/218 (31.19%), Postives = 106/218 (48.62%), Query Frame = 2
Query:   44 KSLS-QHADDLKTLMSAAMTNQGTCLDGF-SHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRK------------LTEETSTVDGWPAWLSPGDRRLLQSSS----VTPNAVVAADGSGNFKTXXXXXXXXPQ---GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            K+LS   A+D+ T +SAA+TN+ TCL+G  S    N    D  +D +++   +   +   +     +  +    +  +K            +TE    V     + +   R+LLQS +    V+    V  +G+GNF T        P    G    ++I + AG+Y E VEV K  + +M IGDG  +T+ITG+R+VVDG TTF SAT  + G  F+
Sbjct:  125 KTLSLSRAEDVHTFLSAAITNEQTCLEGLKSTASENGLSGDLFNDTKLYGVSLALFSKGWVPRRQRSRPIWQPQARFKKFFGFRNGKLPLKMTERARAV-----YNTVTRRKLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFI 337          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16
Identity = 64/215 (29.77%), Postives = 103/215 (47.91%), Query Frame = 2
Query:    8 KAVEDL--EEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLL----QSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            ++VE+L   E+PN+ S     +++ T +S+ +T+  TC+D        + V   L D    +      ALA+  +++  D            TE  S +   P+WL   D++ L    ++     + VVA DG+G + T        PQ   KR++I IK G+Y E V +     N+  IGDG+  TIIT + +  +   TF +ATVA  G GF+
Sbjct:  109 RSVEELLGGEFPNRGSY----ENVHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLED----LISRARIALALFISISPRDN-----------TELISVIPNSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFI 304          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16
Identity = 65/200 (32.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALS--DGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPG-------DRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQ-GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATVAVVGEGFL 634
            D +  MSAA+  Q        + +    V + +S  DG +HV    SNAL+M+ +  +         N    T   +  DG+     PG          L   S +  +  V  DG   +KT        P+  G ++++I+I  GVY ENV V  + KN++FIGDG  +T+ITGS N  + G TT+ +ATV VVG+GF+
Sbjct:  141 DARAWMSAALVYQYDSWSALKYVNDTSQVGETMSFLDGLIHVT---SNALSMMVSYDNFG------DNVASWTYPATERDGFWEKTGPGLGLDPSTGLNLGFPSGLKEDVTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFM 331          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16
Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = 2
Query:   65 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLL----QSSSVTPNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +++ T +S  +T+  TC+D        + V   L D    +      ALA+  +++  D            TE  S V   P+WLS  D++ L    ++     + VVA DG+G + T        PQ   KR+II IK G+Y E V +     N+  IGDG+  TIITG+ +  +   TF +AT A  G+GF+
Sbjct:  126 ENIHTWLSGVLTSYITCIDEIGDGAYKRRVEPQLQD----LISKAKVALALFISISPRDN-----------TELNSVVPNSPSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFI 304          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 2
Query:  371 VVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            +VA DGSGNF T        P+ G K ++I IK G+Y+E + + KK  N+  +GDGR  T+++G  N VDG  TF SAT+AV   GF+
Sbjct:   47 IVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFM 134          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 2
Query:  371 VVAADGSGNFKTXXXXXXXXPQGGTKRY---IIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGF 631
            VVA DGS   +T         + G  R    II IKAGVY E +E+ +  KNIM +GDG  RTI+T +RNV DGSTT+ SAT  V G+GF
Sbjct:  207 VVARDGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGF 296          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15
Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALS--DGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPG---DRRLLQSSSVTPNAVVAADGSGN--FKTXXXXXXXXPQGG-TKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATVAVVGEGFL 634
            D +  MSAA+  Q  C  G    +  K V D ++  +G V+   +  NAL+M+ +       ++  S  R  TE     +     L  G   +  L   S +T +  V  +G  +  +KT        P    T +++IRI+ GVY E V V  + KN++FIGDG  +T+ITGS NV   G TTF+SATV V+G+GF+
Sbjct:  189 DARAWMSAALAYQFDCWSGLKTVNDTKQVVDTITFFEGLVN---LTGNALSMMLSFDSFGDDVV--SWIRPATERDGFWEKAGPSLGSGTGTEASLGFPSGLTEDVTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFM 381          
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15
Identity = 61/191 (31.94%), Postives = 92/191 (48.17%), Query Frame = 2
Query:   68 DLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTXXXXXXXXPQG--GTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634
            D++  +S A+TN  TC +  S    + H  ++++   +       N LA+ K M        +     K+T +T         LS G++          + VVA DGSG++KT         +   G+ RY+I +K GVY E V V  K  NIM  GDG  +TIITG ++   G +T+KSAT    G+GF+
Sbjct:   94 DVQAWLSTALTNLDTCQEEMSELGVSSHSLESITIDVI-------NTLAINKRMEQNG----KEFGISKITMKT---------LSIGEK---------VDVVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFV 255          
The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PME7_ARATH1.720e-1729.60Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME30_ARATH8.534e-1728.43Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME20_ARATH8.534e-1731.19Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME19_ARATH1.115e-1629.77Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME51_ARATH1.456e-1632.50Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME42_ARATH1.901e-1630.93Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME56_ARATH7.224e-1645.45Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME36_ARATH1.609e-1550.00Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME64_ARATH3.585e-1533.84Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME38_ARATH6.116e-1531.94Putative pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bp
GAGGCACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTT
TATCACAGCATGCGGATGATCTCAAAACCTTAATGAGTGCCGCGATGACC
AATCAGGGGACGTGTCTTGATGGGTTCTCGCATGATGATGCTAATAAGCA
CGTGCGGGATGCGTTGTCAGACGGCCAGGTTCATGTTGAGAAGATGTGTA
GCAATGCGCTTGCTATGATCAAGAACATGACGGACACTGACATGATGATC
ATGAGGACTTCAAACAACAGGAAGCTGACAGAGGAGACCAGTACGGTTGA
TGGGTGGCCGGCGTGGCTGTCCCCCGGCGACAGGAGGCTGTTGCAGTCCT
CGTCGGTGACACCGAACGCGGTGGTGGCGGCAGATGGCAGCGGAAACTTT
AAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTCAGGGAGGCACTAAGCG
GTATATTATTAGGATTAAAGCTGGTGTTTATCGGGAAAATGTTGAGGTGA
CAAAGAAGCATAAAAATATAATGTTCATCGGTGACGGAAGGACTAGAACT
ATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCACAACTTTCAAGTC
TGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
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