CN182062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13 Identity = 58/214 (27.10%), Postives = 94/214 (43.93%), Query Frame = 2 Query: 65 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS---------------------VTPNAVVAADGSGNFKTXXXXXXXXPQGGTKR---YIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634 + + +L+S +TNQ TCLDG +A A+ ++ ++ S +L ++ + + ++ + S + L ST L G R+ + V+ +V S NF T P ++I + GVY E + V KN+M +GDG +TIITG+ NVVDG TT+ ++ AVVGE F+ Sbjct: 183 EHVNSLLSGVVTNQQTCLDGLV--EAKSGFAAAIGSPMGNLTRLYSISLGLVSHALNRNLKRFKASKGKILGGGNSTYREPLETLIKGLRKTCDNDKDCRKTSRNLGELGETSGGSILVSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFM 394
BLAST of CN182062 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.841e-11 Identity = 47/161 (29.19%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 164 LSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVT----PNAVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFL 634 + D ++H E M ++ L + + + + + + R TE V P+WLS D++ L + T + +VA D +GN+ PQ KR++I IK +Y E V + N+ I DG+ TIIT + + + TF +AT A G+GF+ Sbjct: 7 MEDSKLH-EDMENDMLGDLTSRAREALALFISISLRDNTELNLVVPNGPSWLSHVDKKDLYLNDETLKKITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFI 166 The following BLAST results are available for this feature:
BLAST of CN182062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182062 ID=CN182062; Name=CN182062; organism=Citrus sinensis; type=EST; length=634bpback to top |