CN182061

Overview
NameCN182061
Unique NameCN182061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.821e-51
Identity = 97/163 (59.51%), Postives = 120/163 (73.62%), Query Frame = -2
Query:   29 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 517
            EN+ +  K KN+M +GDG+ +T+I GSR+   G TT+K+ATVA +GEGF+ARD+TF N AGP   QAVALRVGAD S  + C +  YQD+LY HS RQF+    I GTVDFIFGN+A V Q+C+I ARKP  GQ+N VTAQGR++P QNTGI IQ  RI A S
Sbjct:  254 ENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES 416          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.602e-51
Identity = 102/171 (59.65%), Postives = 120/171 (70.18%), Query Frame = -2
Query:    5 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGS 517
            EN+ V   + +IM +GDG   TIITG R+V  G TT+ SAT  + G  F+A+ ITF+NTAGP+K QAVALR  +DLS FY C +  YQDTL VHS RQF+  C I GTVDFIFGNAAAV QNC I  R+P  GQ N++TAQGR DP QNTGI I  SRI    DLKPV G+
Sbjct:  263 ENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGT 433          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.773e-50
Identity = 97/172 (56.40%), Postives = 124/172 (72.09%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            EN+E+ ++   IMFIGDG  RT+I  +R+  DG T F SATV V G GF+A+D++F N AGP KHQAVALR  +DLSA+Y C   +YQDT+YVHS++QF+  C I GTVDFIFG+A+ V QNC ++AR+PN  QK + TAQGR +  + TGI I  SRI A  DL PVQ +F
Sbjct:  247 ENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANF 418          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.773e-50
Identity = 93/159 (58.49%), Postives = 118/159 (74.21%), Query Frame = -2
Query:   41 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRI 517
            EN+++ K   N+M  GDG+ +T + GSRN +DG+ TF++AT AV G+GF+A+DI F N AG SKHQAVALR G+D S F+ C    +QDTLY HSNRQF+ +C I GT+DFIFGNAA V Q+C I  R+P   Q N +TAQG+ DPNQNTGI+IQKS I
Sbjct:  313 ENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTI 471          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.435e-50
Identity = 98/168 (58.33%), Postives = 120/168 (71.43%), Query Frame = -2
Query:   14 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPV 517
            EN++V   + NIM +GDG  +TIIT  R+V  G TT+ SAT    G+ F+A+D+TF NTAGP + QAVA+R  +DLS FY   +  +QDTLY+HS RQFF  C I+GT+DFIFGNAA V QNC I  R+P  GQ N++TAQGR DP QNTGI I  SRI A SDLKPV
Sbjct:  321 ENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPV 488          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.612e-48
Identity = 100/168 (59.52%), Postives = 114/168 (67.86%), Query Frame = -2
Query:   14 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPV 517
            EN+ V   + NIM +GDG   TIITG R+V  G TT+ SAT  + G  F+A+ I FQNTAGP+K QAVALR  +DLS FY C +  YQDTL VHS RQF+  C I GTVDFIFGNAA V QNC I  R P  GQ N++TAQGRTD  QNTGI I  S I    DLKPV
Sbjct:  267 ENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPV 434          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.027e-47
Identity = 95/170 (55.88%), Postives = 121/170 (71.18%), Query Frame = -2
Query:   11 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQ 517
            E V+VTKK  ++ FIGDG T+T ITGS N   G   T+ +ATVA+ G+ F A++I F+NTAGP  HQAVALRV ADL+ FYNC +  YQDTLYVHS+RQFF +C ++GTVDFIFG+   VLQNC+I  RKP   Q  M+TAQGR+D  ++TG+V+Q   I       PV+
Sbjct:  299 EKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVK 468          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.342e-47
Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENVE+ KK   IMFIGDG  +T+I  +R+ +DG +TF++ TV V G+G++A+DI+F N+AGP+K QAVA R G+D SAFY C+   YQDTLYVHS +QF+  C I GT+DFIFGNAA V QN  ++ARKPN G K   TAQ R   +Q TGI I   RI A  DL PV+ +F
Sbjct:  261 ENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENF 432          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.289e-47
Identity = 92/170 (54.12%), Postives = 125/170 (73.53%), Query Frame = -2
Query:   11 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVV-DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQ 517
            E VEVTKK  ++MF+GDG T+T+ITG    + D   T+++A+VAV G+ F+A+DI F+NTAG ++HQAVALRV AD + F+NC M  YQDTLYVH++RQF+ NC ++GT+DF+FG+A AV QNC+   R+P   Q+ +VTAQGR D  + TGIVI  SRI   +   PV+
Sbjct:  431 EKVEVTKKMLHVMFVGDGPTKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVK 600          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.531e-46
Identity = 89/171 (52.05%), Postives = 116/171 (67.84%), Query Frame = -2
Query:    5 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGS 517
            E + + KK  N+  +GDGR  T+++G  N VDG  TF SAT+AV   GF+A+D+  +NTAGP K QAVALR+  D++  Y C + AYQDTLY +S RQF+ +C I GTVDFIFG AAAV Q C I ARKP  GQ N++TAQ R +    +G   QK  I A+SDL P++G+
Sbjct:   85 EVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGT 255          
The following BLAST results are available for this feature:
BLAST of CN182061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME16_ARATH5.821e-5159.51Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME59_ARATH7.602e-5159.65Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME40_ARATH3.773e-5056.40Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU3.773e-5058.49Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME33_ARATH6.435e-5058.33Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME60_ARATH4.612e-4859.52Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME58_ARATH1.027e-4755.88Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME39_ARATH1.342e-4755.81Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME43_ARATH2.289e-4754.12Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME56_ARATH2.531e-4652.05Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182061 ID=CN182061; Name=CN182061; organism=Citrus sinensis; type=EST; length=518bp
GGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGAT
TTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGTCCTGCCTTGGGC
TGTGACCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCAC
AATTTTGTAACACGGCTGCAGCATTACCAAAAATGAAATCAACCGTGCCA
GCAATTAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGT
GTCTTGGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTC
CCACTCGCAGTGCCACTGCCTGGTGCTTTGAGGGGCCTGCTGTGTTTTGG
AATGTAATGTCTCGGGCCAAGAATCCTTCACCAACAACAGCAACTGTAGC
AGACTTGAAAGTTGTGCTTCCATCAACCACATTTCTACTTCCTGTGATGA
TAGTTCTAGTCCTTCCGTCACCGATGAACATTATATTTTTATGCTTCTTT
GTCACCTCAACATTTTCC
back to top