CN182061

Overview
NameCN182061
Unique NameCN182061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.305e-46
Identity = 94/169 (55.62%), Postives = 115/169 (68.05%), Query Frame = -2
Query:   26 ENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD 517
            ENV V  + KN++FIGDG  +T+ITGS N  + G TT+ +ATV VVG+GF+ARD+TFQNTAGP  HQAVA R  +D S   NC+ L  QDTLY H  RQF+ NC I G VDFIFGN+AAV Q+C+I        P  G+KN VTAQGR DP+Q+TG V     I  T +
Sbjct:  281 ENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEE 449          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.305e-46
Identity = 96/157 (61.15%), Postives = 110/157 (70.06%), Query Frame = -2
Query:   47 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKS 517
            E V V  K  NIM  GDG  +TIITG ++   G +T+KSAT    G+GF+ RDIT +NTAGP  HQAVALR  +D+S FY C +  YQDTLYVHS RQFF  C I GTVDFIFGNAAAVLQNC I AR P +G  N +TAQ R +PNQ TGIVI  S
Sbjct:  206 EYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNG-VNTITAQSRFNPNQTTGIVIHNS 361          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.317e-46
Identity = 89/172 (51.74%), Postives = 116/172 (67.44%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            E+V + KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+A+ + F+NTAGP  HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GTVDFIFG+AAA+ QNCDI  RK   GQKN VTAQGR D  Q TG VI    +    DLKPV+  F
Sbjct:  336 ESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQF 507          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.317e-46
Identity = 89/169 (52.66%), Postives = 121/169 (71.60%), Query Frame = -2
Query:   11 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQ 517
            E V+V +   +++FIGDG  +T+I+GS++  DG TT+K+ATVA+VG+ F+A++I F+NTAG  KHQAVA+RV AD S FYNC    YQDTLY HS+RQF+ +C I+GT+DF+FG+AAAV QNC +  RKP   Q   +TA GR DP ++TG V+Q   I    D   V+
Sbjct:  292 EYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVK 460          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.317e-46
Identity = 86/165 (52.12%), Postives = 118/165 (71.52%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            ENV + K   N+M  GDG+ +TII+GS+N VDG+ T+++AT A+ G+GF+ +DI   NTAG +KHQAVA R G+D S +Y C    +QDTLY HSNRQF+ +C + GT+DFIFG+AA V Q C I  R+P S Q N +TAQG+ DPNQ++G+ IQ+  I A  ++
Sbjct:  320 ENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV 484          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.363e-46
Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = -2
Query:   41 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRI 517
            EN+ +  K KN+M +GDG+ +T+I GSR+   G  T++SATVA +G+GF+ARDITF N+AGP+  QAVALRVG+D S  Y C +  YQD+LY  S RQF+    I GTVDFIFGN+A V Q+C++ +RK +S Q N VTAQGR+DPNQNTGI I   RI
Sbjct:  267 ENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI 424          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.256e-45
Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = -2
Query:   11 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQ 517
            E V+V K   +++FIGDG  +TII+G++N  DG TT+++ATVA+VG  F+A++I F+NTAG  KHQAVA+RV +D S F+NC    YQDTLY HS+RQFF +C I+GT+DF+FG+AAAV QNC +  RKP   Q   +TA GR DP ++TG V Q   I    D   V+
Sbjct:  295 EYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVK 463          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.142e-45
Identity = 89/164 (54.27%), Postives = 114/164 (69.51%), Query Frame = -2
Query:   26 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD 517
            E +++ K   N++ IG+G T+T ITG+++V DG +TF + TV V G  F+A++I F+NTAGP K QAVALRV AD +  YNC +  YQDTLYVH+ RQF+ +C I GTVDFIFGN  AVLQNC +  RKP   Q  MVTAQGRT+P Q   IV+Q   I   +D
Sbjct:   98 EYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTD 261          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.142e-45
Identity = 93/165 (56.36%), Postives = 115/165 (69.70%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            EN+++     NI+ IGDG   T ITG+R+V DG TTF+SAT+AV GEGFLARDI   NTAGP KHQAVALRV AD  A Y C +  YQDTLY HS RQF+  C I GT+D+IFGNAA V Q C+I ++ P  GQ  ++TAQ R   +++TGI +Q   I A+ DL
Sbjct:  277 ENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDL 441          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.063e-44
Identity = 87/172 (50.58%), Postives = 116/172 (67.44%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            E V V KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+A+ + F+NTAG   HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GT+DFIFG+AAA+ QNC+I  RK   GQKN VTAQGR D  Q TG V+   +I A  DLKPV+  +
Sbjct:  341 EYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEY 512          
The following BLAST results are available for this feature:
BLAST of CN182061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME51_ARATH3.305e-4655.62Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME38_ARATH3.305e-4661.15Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME45_ARATH4.317e-4651.74Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME28_ARATH4.317e-4652.66Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME1_ARATH4.317e-4652.12Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME35_ARATH7.363e-4657.23Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME21_ARATH1.256e-4552.66Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN2.142e-4554.27Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME12_ARATH2.142e-4556.36Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME13_ARATH1.063e-4450.58Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182061 ID=CN182061; Name=CN182061; organism=Citrus sinensis; type=EST; length=518bp
GGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGAT
TTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGTCCTGCCTTGGGC
TGTGACCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCAC
AATTTTGTAACACGGCTGCAGCATTACCAAAAATGAAATCAACCGTGCCA
GCAATTAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGT
GTCTTGGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTC
CCACTCGCAGTGCCACTGCCTGGTGCTTTGAGGGGCCTGCTGTGTTTTGG
AATGTAATGTCTCGGGCCAAGAATCCTTCACCAACAACAGCAACTGTAGC
AGACTTGAAAGTTGTGCTTCCATCAACCACATTTCTACTTCCTGTGATGA
TAGTTCTAGTCCTTCCGTCACCGATGAACATTATATTTTTATGCTTCTTT
GTCACCTCAACATTTTCC
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