CN182061

Overview
NameCN182061
Unique NameCN182061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 5.834e-43
Identity = 89/170 (52.35%), Postives = 111/170 (65.29%), Query Frame = -2
Query:   26 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVD-GSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI-----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD 517
            E V V  + KN++FIGDG  +T+ITGS NV   G TTF+SATV V+G+GF+ARD+T +NTAG   HQAVA R  +D S   NC+ L  QDTLY HS RQF+  C I G VDFIFGN+AAV Q+CDI     H++    G  N +TA GR D +Q+TG V     I  T +
Sbjct:  331 ETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEE 500          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.895e-42
Identity = 85/160 (53.12%), Postives = 114/160 (71.25%), Query Frame = -2
Query:   41 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRI 517
            E V VTKK  ++ FIGDG  +T+ITGS N   G   TF +AT+ + G+ F A++I  +NTAGP   QAVALRV AD + F++C +  +QDTLYVHS+RQF+ +C ++GTVDFIFG+A  +LQNC I  RKPN GQ  MVTAQGR++  ++TG+V+    I
Sbjct:  297 EKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHI 456          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.424e-42
Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            ENV + K   N+   GDGR +TII+GS N+VDG  TF ++T A  G+GF+ +D+   NTAGP KHQAVA R  +D S +Y C    YQDTLY HSNRQ++ NC + GTVDFIFG    V Q C I  R+P   Q N +TA+G  + NQNTGI I +  I    ++
Sbjct:  700 ENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV 864          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.345e-39
Identity = 81/157 (51.59%), Postives = 101/157 (64.33%), Query Frame = -2
Query:   47 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKS 517
            E V V K+   +  IGDG T+T  TGS N  DG  T+ +AT  V G  F+A+DI F+NTAG  KHQAVALRV AD + FYNC M  +QDTLYV S RQF+ +C I+GT+DF+FG    V QNC +  R P  GQ+ +VTA GR   N  + +V Q S
Sbjct:  171 ETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSS 327          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.942e-38
Identity = 82/165 (49.70%), Postives = 103/165 (62.42%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            E V +     N+  IGDG+  TIITG+ +  +   TF +AT A  G+GF+  D+ F+NT GP+K  AVALRV  D+S  Y C +  YQD LY H +RQF+  C I GTVDFI GNAAAV Q C I AR+PN GQ N +TAQ R   +  +G  IQ   I A+SDL
Sbjct:  255 EIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDL 419          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.942e-38
Identity = 83/165 (50.30%), Postives = 104/165 (63.03%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            E V +     N+  IGDG+  TIIT + +  +   TF +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQK  I A+SDL
Sbjct:  255 EIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDL 419          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.327e-38
Identity = 81/165 (49.09%), Postives = 103/165 (62.42%), Query Frame = -2
Query:   23 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL 517
            E V +     N+  IGDG+  TIITG+ +  +   T+ +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQ   I  +SDL
Sbjct:  228 EIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDL 392          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.818e-36
Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = -2
Query:    2 GDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 472
            G+G+  T+I G  +   G++   +AT+ V G+GF+ARDI  +N AGP  HQA+AL + +D S  Y C +  YQDTLY  + RQF+  C I GT+DFIFGNAAAV Q+C+I  R+P+  +  N++ A GRTD  QNTG  +   RI   SDL PV+  +
Sbjct:  252 GNGKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKY 409          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.022e-36
Identity = 82/170 (48.24%), Postives = 106/170 (62.35%), Query Frame = -2
Query:   17 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RTDPNQNTGIVIQKSRIGATSDLKP 517
            E V + KK  NI   GDG  +T+I+ +R+V    G+TT  SATV V  EGF+A+ + F+NTAGP  HQA A+RV  D +  +NC    YQDTLYV++ RQF+ NC+++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+Q  RI     L P
Sbjct:  316 EQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTP 485          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.178e-35
Identity = 84/169 (49.70%), Postives = 105/169 (62.13%), Query Frame = -2
Query:   20 ENVEVTKKHKNIMFIGDGRTRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLK 517
            E V + KK  N+   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I FQNTAGP  HQAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI A  +L+
Sbjct:  312 EQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELE 480          
The following BLAST results are available for this feature:
BLAST of CN182061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME64_ARATH5.834e-4352.35Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME23_ARATH2.895e-4253.13Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME26_ARATH8.424e-4249.70Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_MEDSA1.345e-3951.59Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME42_ARATH1.942e-3849.70Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME19_ARATH1.942e-3850.30Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME30_ARATH4.327e-3849.09Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME54_ARATH1.818e-3646.84Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME4_ARATH9.022e-3648.24Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_BRANA1.178e-3549.70Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182061 ID=CN182061; Name=CN182061; organism=Citrus sinensis; type=EST; length=518bp
GGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGAT
TTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGTCCTGCCTTGGGC
TGTGACCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCAC
AATTTTGTAACACGGCTGCAGCATTACCAAAAATGAAATCAACCGTGCCA
GCAATTAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGT
GTCTTGGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTC
CCACTCGCAGTGCCACTGCCTGGTGCTTTGAGGGGCCTGCTGTGTTTTGG
AATGTAATGTCTCGGGCCAAGAATCCTTCACCAACAACAGCAACTGTAGC
AGACTTGAAAGTTGTGCTTCCATCAACCACATTTCTACTTCCTGTGATGA
TAGTTCTAGTCCTTCCGTCACCGATGAACATTATATTTTTATGCTTCTTT
GTCACCTCAACATTTTCC
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