CN188867

Overview
NameCN188867
Unique NameCN188867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 63/109 (57.80%), Postives = 78/109 (71.56%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L R KAN +A+LG Y G+   G  AAESL V  + Y
Sbjct:  259 ALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 64/110 (58.18%), Postives = 78/110 (70.91%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  250 RTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  262 RTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  262 RTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  256 ALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  256 ALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  256 ALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  256 ALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  256 ALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
The following BLAST results are available for this feature:
BLAST of CN188867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_CAEEL5.919e-2857.80Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOA_RAT1.319e-2755.96Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_DICDI2.938e-2758.18Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_PLAFA1.116e-2659.09Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF71.116e-2659.09Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOA_RABIT1.116e-2655.05Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB1.116e-2655.05Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR1.116e-2655.05Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_MOUSE1.116e-2655.05Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.116e-2655.05Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0006O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188867 ID=CN188867; Name=CN188867; organism=Citrus sinensis; type=EST; length=705bp
GCAGGTTTTTGTCAAAATACCTCTTCATTTATTCAGTGAATCAGCCAAGA
TATAATCACATGTGAGAAAGCAACGCATTAGAAAAGAACCGAAAGCAATA
AGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTTAGCG
CCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAACAGTTT
TCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTT
ATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAATGTGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCAC
CAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGG
GCCCG
back to top