CN188867

Overview
NameCN188867
Unique NameCN188867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  256 ALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 59/109 (54.13%), Postives = 69/109 (63.30%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  256 ALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  256 ALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 60/108 (55.56%), Postives = 69/108 (63.89%), Query Frame = -1
Query:  376 LQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 699
            L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  257 LLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            + L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  282 KLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            + L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  293 KLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = -1
Query:  376 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 705
            R L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  251 RTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
The following BLAST results are available for this feature:
BLAST of CN188867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_LAMJA1.234e-2554.13Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_PANTR1.234e-2550.46Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_BOVIN1.234e-2554.13Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALF2_LAMJA2.105e-2552.29Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_CHICK2.105e-2555.56Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALFC_ORYSJ2.750e-2555.45Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALDOC_MACFA2.750e-2550.46Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN3.591e-2550.46Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALFC1_ARATH4.690e-2555.45Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF2_PLABA6.125e-2556.36Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188867 ID=CN188867; Name=CN188867; organism=Citrus sinensis; type=EST; length=705bp
GCAGGTTTTTGTCAAAATACCTCTTCATTTATTCAGTGAATCAGCCAAGA
TATAATCACATGTGAGAAAGCAACGCATTAGAAAAGAACCGAAAGCAATA
AGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTTAGCG
CCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAACAGTTT
TCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTT
ATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAATGTGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCAC
CAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGG
GCCCG
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