CN188867

Overview
NameCN188867
Unique NameCN188867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  256 ALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  256 ALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  256 ALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  256 ALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22
Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = -1
Query:  415 LQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 699
            L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  246 LHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  256 ALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21
Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = -1
Query:  376 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  256 ALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN188867 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = -1
Query:  511 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 702
            AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   37 ALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN188867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_HUMAN2.328e-2452.29Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOC_RAT3.040e-2451.38Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOB_PONAB3.040e-2452.29Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOC_MOUSE5.186e-2450.46Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_RAT1.155e-2350.46Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALDOC_CARAU1.277e-2252.29Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALFC2_PEA2.179e-2257.89Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDCB_DANRE1.412e-2149.54Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE5.366e-2148.62Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST6.560e-1968.75Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0006O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188867 ID=CN188867; Name=CN188867; organism=Citrus sinensis; type=EST; length=705bp
GCAGGTTTTTGTCAAAATACCTCTTCATTTATTCAGTGAATCAGCCAAGA
TATAATCACATGTGAGAAAGCAACGCATTAGAAAAGAACCGAAAGCAATA
AGCACAAGAAAACATTATCAATTATGTGACAAAATCACAGAAATTTAGCG
CCATTAGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATAAACAGTTT
TCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTT
ATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAGAATGTGC
CAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACA
ACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGA
GACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAG
GGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCT
TCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGA
AGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAG
CTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCAC
CAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGG
GCCCG
back to top