CN182055

Overview
NameCN182055
Unique NameCN182055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML1_ORYSI (Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 128/149 (85.91%), Postives = 138/149 (92.62%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MADQL+++QI EF+EAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMI+EVDAD NG I+F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISAAELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:    1 MADQLSEEQIVEFREAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDADSNGNIEFKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          

HSP 2 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 3
Query:   60 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 314
            MA +L D D   E KEAF +FDKD +G I+  EL  VM ++G+  T+ E+ +MI+E D DG+G I++ EF+  M  K +    EE+
Sbjct:   73 MARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAKKRRKRIEEK 158          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 125/136 (91.91%), Postives = 133/136 (97.79%), Query Frame = 3
Query:   81 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 488
            +QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV
Sbjct:    1 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 136          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 124/149 (83.22%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 124/149 (83.22%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 124/149 (83.22%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_COLGL (Calmodulin OS=Colletotrichum gloeosporioides PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68
Identity = 124/149 (83.22%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_PNECA (Calmodulin OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.203e-68
Identity = 126/145 (86.90%), Postives = 137/145 (94.48%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            LT++QISEFKEAFSLFDKDGDG ITTKELG VMRSLGQNPTEAELQDM+NEVDADGNGTIDFPEFL +MARKMKD DSEEE++EAF+VFDKD NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG I+Y EFVK+M++K
Sbjct:    7 LTEEQISEFKEAFSLFDKDGDGSITTKELGIVMRSLGQNPTEAELQDMVNEVDADGNGTIDFPEFLAMMARKMKDVDSEEEIREAFKVFDKDGNGIISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGVIDYSEFVKMMLSK 151          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_EMENI (Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 9.408e-68
Identity = 123/149 (82.55%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SE+KEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.408e-68
Identity = 122/147 (82.99%), Postives = 141/147 (95.92%), Query Frame = 3
Query:   66 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            + LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG IDFPEFL +MARKM+DTD+EEE++EAF+VFDKD NG+ISAAELRHVMT+LGEKLT+EEVDEMIREAD+DGDGQ+NY+EFVK+M+ +
Sbjct:    5 ESLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMMIVR 151          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALM_ASPOR (Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 9.408e-68
Identity = 123/149 (82.55%), Postives = 141/149 (94.63%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            MAD LT++Q+SE+KEAFSLFDKDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD+D NGFISAAELRHVMT++GEKLTD+EVDEMIREAD DGDG+I+Y EFV++MM K
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQK 149          
The following BLAST results are available for this feature:
BLAST of CN182055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
CML1_ORYSI4.223e-6885.91Calmodulin-like protein 1 OS=Oryza sativa subsp. i... [more]
CALM_ORYLA4.223e-6891.91Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_NEUCR4.223e-6883.22Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]
CALM_MAGGR4.223e-6883.22Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4[more]
CALM_COLTR4.223e-6883.22Calmodulin OS=Colletotrichum trifolii PE=3 SV=2[more]
CALM_COLGL4.223e-6883.22Calmodulin OS=Colletotrichum gloeosporioides PE=2 ... [more]
CALM_PNECA7.203e-6886.90Calmodulin OS=Pneumocystis carinii PE=3 SV=1[more]
CALM_EMENI9.408e-6882.55Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=... [more]
CALM_DICDI9.408e-6882.99Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_ASPOR9.408e-6882.55Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182055 ID=CN182055; Name=CN182055; organism=Citrus sinensis; type=EST; length=686bp
GAGGATTTGATTTTGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAA
AAGAAGAAAATGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAA
AGAAGCCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCA
AGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCT
GAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTAT
TGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCG
ACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAG
AATGGTTTCATCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGG
GGAGAAGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATG
TCGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATG
GCTAAGTAAGTGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAAT
TGGTTGATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAA
TTTGATAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCA
ATTTGTCTTGTGACTGGAGCAACTTTTCAGTTTTTT
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