CN182055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.855e-37 Identity = 74/145 (51.03%), Postives = 106/145 (73.10%), Query Frame = 3 Query: 72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.855e-37 Identity = 75/148 (50.68%), Postives = 111/148 (75.00%), Query Frame = 3 Query: 66 DQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.576e-37 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+EVD +G G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+++M Sbjct: 24 ELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.122e-36 Identity = 75/143 (52.45%), Postives = 100/143 (69.93%), Query Frame = 3 Query: 69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+EVD + G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+K+M Sbjct: 24 ELTEDQKQEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIM 166
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALML_DICDI (Calmodulin-like protein OS=Dictyostelium discoideum GN=calB PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.465e-36 Identity = 74/134 (55.22%), Postives = 105/134 (78.36%), Query Frame = 3 Query: 96 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +KEAF+LFDKD DG IT +ELG VMRS+G NPT+ EL+D+ E+D DG+G +DF +F +LM RKMK +DSE ++K+AF+VFDK NG+ + +L+H +T++GEKLT EE D M+++A DGQI+ +EFV+V+ Sbjct: 11 YKEAFNLFDKDKDGKITIQELGIVMRSVGSNPTQQELKDIAKEID-DGSGLVDFSKFSSLMTRKMKYSDSEADIKQAFKVFDKKGNGYANIQDLKHTLTSIGEKLTKEEFDNMLKDAKT-VDGQIHVDEFVRVI 142
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana GN=CML9 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = 3 Query: 60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 503 MAD TD+QI EF EAF L DKD DG IT ++L VM+S+G+NP +LQ M+++VD GNG I F +FL +MA+ + +EL E FRVFD+D +G IS EL M ++G K+T EE + M+READ+DGDG +++ EF K+M+A Sbjct: 1 MADAFTDEQIQEFYEAFCLIDKDSDGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: TNNC1_COTJA (Troponin C, slow skeletal and cardiac muscles OS=Coturnix coturnix japonica GN=TNNC1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.264e-36 Identity = 73/148 (49.32%), Postives = 111/148 (75.00%), Query Frame = 3 Query: 66 DQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF +FL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ + + DG+I+Y+EF++ M Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDQFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGNKNNDGRIDYDEFLQFM 157
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.262e-36 Identity = 71/143 (49.65%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 +LT+DQ E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N +EF+++M Sbjct: 24 ELTEDQKQEIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM 166
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CATR_CHLRE (Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.262e-36 Identity = 73/142 (51.41%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497 LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +EF+++M Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.495e-36 Identity = 73/147 (49.66%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 66 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506 D L+DDQ+S KEAF LFD DGDG I ELG +MRSLG NPT+A+L+ +I + + DF FL+LMA+ +K + +L++AF+V DK+ GF++ A+LRH++T++GEKL E DE I+E DV DG+I YE+F+ M+AK Sbjct: 4 DGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENL--SSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148 The following BLAST results are available for this feature:
BLAST of CN182055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182055 ID=CN182055; Name=CN182055; organism=Citrus sinensis; type=EST; length=686bpback to top |