CN182055

Overview
NameCN182055
Unique NameCN182055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana GN=CML17 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30
Identity = 66/152 (43.42%), Postives = 103/152 (67.76%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM----KDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            ++ +L ++QI+E +E F  FD++ DG +T  ELG+++R+LG  P+  + + +I++ D   NG ++FPEF+ L++ ++    K T   +EE+L   FR+FD D NGFI+AAEL H M  LG  LT  E+  MI+EAD DGDG+IN++EF K +
Sbjct:    5 VSKKLDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQEFAKAI 156          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CATR6_PARTE (Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1f PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 63/145 (43.45%), Postives = 91/145 (62.76%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            LT++++ E KEAF LFD DG   I  KEL   M SLG       +  MI+++D DG+G IDF EFL LM  ++ + DS+ ++++ F +FD ++ GFI+  +LR V   LGE + D E+ EMI  AD DGD Q+ +E+F  +M  K
Sbjct:   36 LTEEEVLEIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGFITLKDLRKVAKELGETMDDSELQEMIDRADSDGDTQVTFEDFYNIMTKK 180          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML18_ARATH (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana GN=CML18 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 64/144 (44.44%), Postives = 101/144 (70.14%), Query Frame = 3
Query:   69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM-KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +L D+Q++E +E F  FD++ DG +T  ELG+++RSLG  P++ +L  +I + D + NG ++F EF+ L+   + K   ++++LK  FR+FD+D NG+I+AAEL H M  LG  LT EE+  MI+EAD DGDG I+++EFV+ +
Sbjct:   12 KLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEFVALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDGDGCIDFQEFVQAI 155          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML19_ARATH (Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.786e-30
Identity = 62/142 (43.66%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            LT+ +  E +E F LFD DG G I   EL   MRSLG      ++ +++ EVD + +G IDF EF+++M  K  + DS +EL +AF++ D D NG IS  +++ +   LGE  TD +++EMI EAD D DG++N EEF+K+M
Sbjct:   20 LTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMNNQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMM 161          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALL4_HUMAN (Calmodulin-like protein 4 OS=Homo sapiens GN=CALML4 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.017e-29
Identity = 62/143 (43.36%), Postives = 96/143 (67.13%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 488
            MA  L+ DQI+E+KE FSL+DK   G I   +L   MR LG +PT  E+Q  +     DGNG +DF  FL +M  ++K  D ++E+  A  + DK++ G++ A++LR  +T+LGEKLT +EVD++ READ++ +G++ Y+EF+
Sbjct:   44 MAKFLSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGELDFSTFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEFI 186          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLC2_DROME (Myosin-2 essential light chain OS=Drosophila melanogaster GN=Mlc-c PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 66/145 (45.52%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   75 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 503
            T+DQ++EF+EAF+LFD  GDG I   ++G  +R+LGQNPTE++++   +++  D    I F  FL +     K +  D+ ++  E  R FDKD +G+IS+AELRH++T LGEKLTDEEV++++   + D  G INYEEFV+++M+
Sbjct:    5 TEDQLAEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDER--ISFEVFLPIYQAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANME-DQQGNINYEEFVRMVMS 146          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CATR4_PARTE (Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1d PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            LT++++ E KEAF LFD DG   I  KEL   M SLG       +  MI+++D DG+G IDF EFL LM  ++ + DS+ ++++ F +FD ++ G I+  +LR V   LGE + D E+ EMI  AD DGD Q+ +E+F  +M  K
Sbjct:   34 LTEEEVLEIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 178          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CATR3_PARTE (Caltractin ICL1c OS=Paramecium tetraurelia GN=Icl1c PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            LT++++ E KEAF LFD DG   I  KEL   M SLG       +  MI+++D DG+G IDF EFL LM  ++ + DS+ ++++ F +FD ++ G I+  +LR V   LGE + D E+ EMI  AD DGD Q+ +E+F  +M  K
Sbjct:   36 LTEEEVLEIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 180          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CATR2_PARTE (Caltractin ICL1b OS=Paramecium tetraurelia GN=Icl1b PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 3
Query:   72 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            LT++++ E KEAF LFD DG   I  KEL   M SLG       +  MI+++D DG+G IDF EFL LM  ++ + DS+ ++++ F +FD ++ G I+  +LR V   LGE + D E+ EMI  AD DGD Q+ +E+F  +M  K
Sbjct:   35 LTEEEVLEIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 179          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CALGL_BOTIN (Calglandulin OS=Bothrops insularis PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA-RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            MA  LT +QI+E+K  F +FD++G+G + T +L ++M  +G NPT+ +L +M  +VD D  GT +   FL LM     K  + +EEL+ AF+VFDK+  G+I    L++V+ N GE L ++E + M++EAD DGDG I+YEEFV +M
Sbjct:    1 MAATLTPEQITEYKGIFEMFDEEGNGLVKTDDLESLMSLVGINPTKRDLANMAKDVDKDKKGTFNCDGFLALMGIYHEKSKNQDEELRAAFKVFDKEHKGYIEWDTLKYVLMNAGEPLNEQEAELMMKEADKDGDGTIDYEEFVAMM 147          
The following BLAST results are available for this feature:
BLAST of CN182055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
CML17_ARATH2.676e-3043.42Probable calcium-binding protein CML17 OS=Arabidop... [more]
CATR6_PARTE4.564e-3043.45Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1... [more]
CML18_ARATH5.961e-3044.44Probable calcium-binding protein CML18 OS=Arabidop... [more]
CML19_ARATH7.786e-3043.66Calcium-binding protein CML19 OS=Arabidopsis thali... [more]
CALL4_HUMAN1.017e-2943.36Calmodulin-like protein 4 OS=Homo sapiens GN=CALML... [more]
MLC2_DROME1.734e-2945.52Myosin-2 essential light chain OS=Drosophila melan... [more]
CATR4_PARTE1.734e-2942.76Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1... [more]
CATR3_PARTE1.734e-2942.76Caltractin ICL1c OS=Paramecium tetraurelia GN=Icl1... [more]
CATR2_PARTE1.734e-2942.76Caltractin ICL1b OS=Paramecium tetraurelia GN=Icl1... [more]
CALGL_BOTIN1.734e-2944.22Calglandulin OS=Bothrops insularis PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182055 ID=CN182055; Name=CN182055; organism=Citrus sinensis; type=EST; length=686bp
GAGGATTTGATTTTGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAA
AAGAAGAAAATGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAA
AGAAGCCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCA
AGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCT
GAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTAT
TGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCG
ACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAG
AATGGTTTCATCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGG
GGAGAAGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATG
TCGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATG
GCTAAGTAAGTGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAAT
TGGTTGATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAA
TTTGATAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCA
ATTTGTCTTGTGACTGGAGCAACTTTTCAGTTTTTT
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