CN182055

Overview
NameCN182055
Unique NameCN182055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRV_MOUSE (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Mus musculus GN=Myl2 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGSLKADYVREMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLR_AEQIR (Myosin regulatory light chain, striated adductor muscle OS=Aequipecten irradians PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 44/143 (30.77%), Postives = 83/143 (58.04%), Query Frame = 3
Query:   69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +L   QI E KEAFS+ D D DG ++ +++  +   LG+ P + EL  M+ E      G ++F  FL++ + K+  TDSEE ++ AF +FD+ +   ++   ++ ++ N+G+    +E+    +EA V+G G+ +Y +F  ++
Sbjct:   12 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 149          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRV_RABIT (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Oryctolagus cuniculus GN=MYL2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + +E+D+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKDEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: SPE2D_STRPU (Calcium-binding protein SPEC 2D OS=Strongylocentrotus purpuratus GN=SPEC2D PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   75 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 500
            ++DQI E+K  F  FD++ DG   T  LG  M+S+G   T AEL++          GT  FP+FL ++  K        + ++ F+  DKD ++  +SA E+R  M +   ++T++++ EMI +AD   DG+ + EEFVK++M
Sbjct:    8 SEDQIKEYKTKFDAFDRNNDGNFPTMFLGNAMKSVGHVLTAAELENSRRV----RKGTTTFPQFLAMILDK--------KCRKVFKAMDKDDKDKLLSADEVRQAMLSFDRQITEDKIKEMIEKADFPNDGKCSLEEFVKMVM 138          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLR_CHLNI (Myosin regulatory light chain, striated adductor muscle OS=Chlamys nipponensis akazara PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 46/143 (32.17%), Postives = 81/143 (56.64%), Query Frame = 3
Query:   69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +L   QI E KEAFS+ D D DG +   +L  +   LG+ P + EL  M+ E      G ++F  FL++ + K+  TDSEE ++ AF +FD+ +   ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   11 KLPQKQIQEMKEAFSMLDVDRDGFVNKDDLKAISEQLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDELETKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 148          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRV_BOVIN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Bos taurus GN=MYL2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +M+ E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  ++ ++T   E+ + EE+D+M      D  G ++Y+  V ++
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMLKEAP----GPINFTVFLQMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYIKEMLTTQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHII 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 497
            +A+ L++++I   K  F   D D  G IT +EL   +   G   +E E++ ++   D DGNGTID+ EF++    + +  + +E L +AF+ FDKD +G I+  E+   M   G  + DE    ++I E D + DG+I+YEEF  +M
Sbjct:  339 IAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAADVDGNGTIDYIEFISATMHRHR-LERDEHLYKAFQYFDKDGSGHITKEEVEIAMKEHG--MGDEANAKDLISEFDKNNDGKIDYEEFCTMM 482          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRC_PATYE (Myosin regulatory light chain, striated adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 46/143 (32.17%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   69 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +L   QI E KEAFS+ D D DG +   +L  +   LG+ P + EL  M+ E      G ++F  FL++ + K+  TD+EE L+ AF +FD+     ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   11 KLPQKQIQEMKEAFSMIDVDRDGFVNKDDLKAISEQLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDTEETLRNAFAMFDELDTKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 148          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLR_HALRO (Myosin regulatory light chain, smooth muscle OS=Halocynthia roretzi PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D + DG I  ++L     SLG+   +  ++DM+    A+ +G ++F  FL L   K+  TD EE + EAF++ D D  G I+   L  +M    ++ +  EV++M   + +D  G ++Y+    ++
Sbjct:   13 QIQEFKEAFTMIDANRDGFIDQEDLKDTYASLGRGIKDERIRDML----AESSGPVNFQIFLGLFGDKLSGTDPEETILEAFKILDADNKGVINKNYLAEIMMTQADRFSQSEVNQMFDISPIDVAGNLDYKSLCYII 146          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML34_ARATH (Probable calcium-binding protein CML34 OS=Arabidopsis thaliana GN=CML34 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 3
Query:   99 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 500
            K  F  FDK+ DG ++  E   V  +     T+ ++     E+D DGNG ++  EF + +         E+ LKE F   D D +G I A+E    MT+LG+K T+E   E +R ADVDGDG +N++EF+ +++
Sbjct:    4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI---------EKMLKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMALVI 128          
The following BLAST results are available for this feature:
BLAST of CN182055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
MLRV_MOUSE2.598e-1734.53Myosin regulatory light chain 2, ventricular/cardi... [more]
MLR_AEQIR4.431e-1730.77Myosin regulatory light chain, striated adductor m... [more]
MLRV_RABIT4.431e-1733.81Myosin regulatory light chain 2, ventricular/cardi... [more]
SPE2D_STRPU5.787e-1734.97Calcium-binding protein SPEC 2D OS=Strongylocentro... [more]
MLR_CHLNI5.787e-1732.17Myosin regulatory light chain, striated adductor m... [more]
MLRV_BOVIN5.787e-1733.09Myosin regulatory light chain 2, ventricular/cardi... [more]
CDPKM_ARATH5.787e-1734.69Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
MLRC_PATYE1.289e-1632.17Myosin regulatory light chain, striated adductor m... [more]
MLR_HALRO1.684e-1631.88Myosin regulatory light chain, smooth muscle OS=Ha... [more]
CML34_ARATH1.684e-1635.82Probable calcium-binding protein CML34 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182055 ID=CN182055; Name=CN182055; organism=Citrus sinensis; type=EST; length=686bp
GAGGATTTGATTTTGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAA
AAGAAGAAAATGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAA
AGAAGCCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCA
AGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCT
GAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTAT
TGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCG
ACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAG
AATGGTTTCATCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGG
GGAGAAGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATG
TCGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATG
GCTAAGTAAGTGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAAT
TGGTTGATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAA
TTTGATAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCA
ATTTGTCTTGTGACTGGAGCAACTTTTCAGTTTTTT
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