CN182055

Overview
NameCN182055
Unique NameCN182055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLR2_CAEEL (Myosin regulatory light chain 2 OS=Caenorhabditis elegans GN=mlc-2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 3
Query:   63 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            A Q     I EFKEAF + D++ DG I   +L  +  S+GQ   ++++  MI E     +G I+F  FL L   ++  TD E  +  AF +FDK   G I   +L  ++ N  GE L ++EV  M +       G+++Y+ F  ++
Sbjct:   18 AAQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE----ASGPINFTVFLTLFGERLTGTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLI 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 41/151 (27.15%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 506
            +A  L D +I+  +  F   D D  G ++++E+   ++ +G      ++  ++ ++D++ +G I + +FL     K      E  L   F+ FD D NG IS  EL+ +    ++   L D+ +D +++E D++GDG+I++ EF+ +M  K
Sbjct:  363 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIP-FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 512          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRS_CHICK (Myosin regulatory light chain 2, skeletal muscle isoform OS=Gallus gallus GN=MYLPF PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D++ DG I   +L     ++G+ N    EL  MI E     +G I+F  FL +   K+K  D E+ +  AF+V D D  G I  + L  ++T   ++ T EE+  M      D  G ++Y+    V+
Sbjct:   25 QIQEFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLR1_CAEEL (Myosin regulatory light chain 1 OS=Caenorhabditis elegans GN=mlc-1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 3
Query:   63 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            A Q     I EFKEAF + D++ DG I   +L  +  S+GQ   ++++  MI E     +G I+F  FL L   ++  TD E  +  AF +FDK   G I   +L  ++ N  GE L ++EV  M +       G+++Y+ F  ++
Sbjct:   18 AAQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE----ASGPINFTVFLTLFGERLTGTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLI 159          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 3
Query:   75 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            ++ ++ +    F + DKDG G +TT E  ++   L  NP    L+ +I   D + +  I+F EF+  +A        E++LK  F+++D D +GFIS  EL  V+     TNL +    + VD+ I E D D DG+I+++EF+ ++
Sbjct:   23 SEAELKKLYRRFQMLDKDGSGTLTTDEFLSIP-DLALNPL---LERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIVDKTIIEGDYDKDGKISFDEFIHMI 164          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: MLRS_BOVIN (Myosin regulatory light chain 2, skeletal muscle isoform OS=Bos taurus GN=MYLPF PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   84 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            QI EFKEAF++ D++ DG I  ++L     ++G+ N    EL  M+ E     +G I+F  FLN+   K+K  D E+ +  AF+V D +  G I    L  ++T   ++ + EE+  M      D  G ++Y+    V+
Sbjct:   27 QIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPINFTVFLNMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVI 161          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  108 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK----------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*VTP 518
            F LFDK+ DG IT +EL   +  LG +   ++L+  ++         + F +F  L     +          D   E +L+EAF VFD+D +GFISA EL+ V+  LG  E    E+V++MI   D + DG++++ EF K MM   V P
Sbjct:   33 FDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEF-KNMMQTVVVP 180          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 44/141 (31.21%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   78 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE-ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +D+  E +  FS  D + DG I+ +EL     +LG+  ++ E    +   D DG+G +DF EF  L+  K+ D + ++ ELK AFR++  +    I+   L+ ++  LGE  T ++   MI   D++ DG ++++EF  +M
Sbjct:   38 EDKNRELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI--KVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGVLSFDEFALMM 176          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: FIMB_DICDI (Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   75 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 284
            ++ +ISEFK +F+ FD++GDG I+  EL  ++   G+  T  E++DMI EVD DGNG+IDF EFL +M +
Sbjct:    5 SESEISEFKASFNQFDENGDGQISALELQKILTKCGEKVTGVEVRDMIKEVDTDGNGSIDFKEFLQVMQK 74          
BLAST of CN182055 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   99 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-------------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 497
            +  F LFD++GDG IT  EL   + +LG       L   ++    +G   + F +F + + R + D                    D EEE++EAF+VFD D +GFISA+EL+ V+  LG  E  +   V EMI   D + DG++++ EF  +M
Sbjct:   36 RRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDF-DALHRALGDALFGSLDGAAAAGEPGGGGGDEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188          
The following BLAST results are available for this feature:
BLAST of CN182055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
MLR2_CAEEL1.022e-1332.19Myosin regulatory light chain 2 OS=Caenorhabditis ... [more]
CDPK2_PLAFK1.022e-1327.15Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
MLRS_CHICK1.334e-1333.09Myosin regulatory light chain 2, skeletal muscle i... [more]
MLR1_CAEEL1.334e-1332.19Myosin regulatory light chain 1 OS=Caenorhabditis ... [more]
CANB1_DICDI1.334e-1332.19Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
MLRS_BOVIN2.972e-1331.65Myosin regulatory light chain 2, skeletal muscle i... [more]
CML43_ARATH2.972e-1334.90Probable calcium-binding protein CML43 OS=Arabidop... [more]
CML38_ARATH2.972e-1331.21Calcium-binding protein CML38 OS=Arabidopsis thali... [more]
FIMB_DICDI3.882e-1348.57Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 S... [more]
CML32_ORYSJ3.882e-1333.12Probable calcium-binding protein CML32 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182055 ID=CN182055; Name=CN182055; organism=Citrus sinensis; type=EST; length=686bp
GAGGATTTGATTTTGCGGGGAAAAAAAAAACCTAGTTTTCGGTGTAAAAA
AAGAAGAAAATGGCGGATCAGCTCACCGACGATCAGATCTCCGAGTTTAA
AGAAGCCTTCAGCTTGTTCGACAAGGACGGCGACGGTTGCATTACCACCA
AGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCT
GAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTAT
TGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCG
ACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAG
AATGGTTTCATCTCAGCTGCTGAACTGCGTCATGTGATGACAAACCTTGG
GGAGAAGCTTACTGATGAGGAAGTCGATGAGATGATAAGGGAAGCTGATG
TCGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATG
GCTAAGTAAGTGACTCCACCCAACCAAAACTTCCTGGAAAAAGAAGAAAT
TGGTTGATTAATATAATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAA
TTTGATAACTCTGAGGTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCA
ATTTGTCTTGTGACTGGAGCAACTTTTCAGTTTTTT
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