CN182049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_ECO57 (50S ribosomal protein L2 OS=Escherichia coli O157:H7 GN=rplB PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_ECO55 (50S ribosomal protein L2 OS=Escherichia coli (strain 55989 / EAEC) GN=rplB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_ECO45 (50S ribosomal protein L2 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_ECO27 (50S ribosomal protein L2 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_ECO24 (50S ribosomal protein L2 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplB PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_AGGAC (50S ribosomal protein L2 OS=Aggregatibacter actinomycetemcomitans GN=rplB PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 69/193 (35.75%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 77 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 652 +R +DF + GVV + +DP R A +A V ++ ++ +A +G+ G + G A + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HPHGGG ++ G Sbjct: 62 YRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLAAGDQIQAGAHAPIKVGNALPMRNIPVGSTVHNVELKPGKGGQIARSAGSYVQIIAREGNYVTLRLR--SGEMRKVLAECSATIGEVGNSEHMLRVLGKAGANRWRGVR------PTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_LISW6 (50S ribosomal protein L2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 2 Query: 53 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGGG 634 HH G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + +GN L ++ IP G VV N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGGG Sbjct: 53 HHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGGG 235
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_LISMO (50S ribosomal protein L2 OS=Listeria monocytogenes GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 2 Query: 53 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGGG 634 HH G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGGG Sbjct: 53 HHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGGG 235
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_LISMF (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 2 Query: 53 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGGG 634 HH G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGGG Sbjct: 53 HHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGGG 235
BLAST of CN182049 vs. ExPASy Swiss-Prot
Match: RL2_LISMC (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 2 Query: 53 HHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGGG 634 HH G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGGG Sbjct: 53 HHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CN182049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182049 ID=CN182049; Name=CN182049; organism=Citrus sinensis; type=EST; length=657bpback to top |