CN182041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.043e-21 Identity = 51/149 (34.23%), Postives = 87/149 (58.39%), Query Frame = -1 Query: 352 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANSTFWKSEXXXXXXXXXXXXXDSHPYVSFTINL 798 VTLF + D+F+ ARE F +RDF Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L++L + +S+ + + +PYV + I++ Sbjct: 227 VTLFTKAIDDFKQQARENKFMVRDFLYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSETFIAWIHIKALRVFTESVLRYGLPVNFQAMLLQPNKKNVKKLREVLKDLYKHLDSSAAVIDGSVDIPGLNLSQQEYYPYVYYKIDV 375
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC1_XENTR (V-type proton ATPase subunit C 1 OS=Xenopus tropicalis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.586e-21 Identity = 48/119 (40.34%), Postives = 77/119 (64.71%), Query Frame = -1 Query: 442 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 798 VTLF + D+FR ARE F +RDF+Y+ E ++ +E+ +L D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L P+ K KK+R +L +L + +S+ Sbjct: 227 VTLFRKAVDDFRHKARENKFVVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTMKKLREVLYDLYKHLDSS 345
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_CAEBR (V-type proton ATPase subunit C OS=Caenorhabditis briggsae GN=vha-11 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.282e-20 Identity = 47/112 (41.96%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 463 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEEL 798 VTLF +V D F+ ARE F +RDF Y E ++ E +KL+ +++ + L++W ++GE+FS+++H A+RVF ES+LRYGLP +F A V+ P+ KK+R L++L Sbjct: 230 VTLFKKVIDEFKNIARENKFIVRDFVYDEETLKAGRTERDKLLAEKQKQYAPLIRWLKINFGEIFSAYIHIKALRVFVESVLRYGLPVNFQAAVIEPAKGQSKKLRQELQKL 341
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_DROME (V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=1 SV=5) HSP 1 Score: 97.4413 bits (241), Expect = 9.510e-20 Identity = 46/115 (40.00%), Postives = 75/115 (65.22%), Query Frame = -1 Query: 454 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGN 798 VTLF +VA+ F++ ARE+ F +RDF Y+ E + E+ KL+ D++ L++W ++ E F + +H A+RVF ES+LRYGLP +F A ++ P+ K K++R +L +L G+ Sbjct: 676 VTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKKQFGPLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQLYGH 790
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_CAEEL (V-type proton ATPase subunit C OS=Caenorhabditis elegans GN=vha-11 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.622e-19 Identity = 46/112 (41.07%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 463 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEEL 798 VTLF +V D F+ ARE F +RDF Y E ++ E +KL+ +++ + L++W ++GE+F++++H A+RVF ES+LRYGLP +F A V+ P+ +KK+R L +L Sbjct: 229 VTLFKKVIDEFKNTARENKFIVRDFVYDEETLKAGRTERDKLMAEKQRQYAPLIRWLKINFGEIFAAYIHIKALRVFVESVLRYGLPVNFQAAVIEPAKGQQKKLRQELHKL 340
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_MANSE (V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.051e-18 Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 463 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEEL 798 VTLF +V D F++ ARE+ F +R+F Y+ + E+ KL+ D++ L++W ++ E F +W+H A+RVF ES+LRYGLP +F A +L PS + +++R L L Sbjct: 226 VTLFKKVVDEFKLHARERKFVVREFAYNEADLVAGKNEITKLLTDKKKQFGPLVRWLKVNFSECFCAWIHVKALRVFVESVLRYGLPVNFQAALLVPSRRSARRLRDTLHAL 337
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.418e-17 Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = -1 Query: 442 TLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCGNANST 795 ++F +V + F+ F +R+F ++ + R ++ K+ ++ + LL+W ++ EVF++W+H A+RVF ES+LRYGLP +F A VL P K K++R +L L +ST Sbjct: 229 SIFKKVYEEFKYNCSRYKFFVREFNFNEQDSVVRQDQINKIASEKRKMLGPLLRWLKVNFSEVFTAWIHIKALRVFVESVLRYGLPVNFQAVVLDPPKKNRKRLRDVLNNLYCKLDST 346
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 472 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSIL 798 V LF + +NF+ EK + +RDF+ QE KL D+++ R+SL++WC ++ E F +W+H VRVF ES+LR+G+P +F A ++ P +KKVR IL Sbjct: 227 VILFKKFYENFKTKIIEKKWVVRDFKLEDNKP---TQERSKLTEDKKNCRTSLIRWCRLNFPEAFMAWVHLKVVRVFVESVLRFGIPFNFQAILMKPQKGADKKVRDIL 332
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_SCHPO (V-type proton ATPase subunit C OS=Schizosaccharomyces pombe GN=SPAPB2B4.05 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = -1 Query: 472 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSIL 798 V +F + AD+F ARE + IR+F + +E+ E + ++ + SSLL++ ++ E F W+H + V+ ESILRYGLPP F + + P K E K+++IL Sbjct: 232 VVVFKKTADSFITKAREAKYTIREFTFEQGLRETEQSEFDDAAVKEKRMLSSLLRYASIAFSESFQGWIHLKCLCVYVESILRYGLPPDFSSVIFQPMAKSEVKIKNIL 340
BLAST of CN182041 vs. ExPASy Swiss-Prot
Match: VATC_YEAST (V-type proton ATPase subunit C OS=Saccharomyces cerevisiae GN=VMA5 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 9.212e-15 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = -1 Query: 457 VTLFGRVADNFRIAAREKGFQIRDFEYSSEAQESRNQELEKLVHDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKGEKKVRSILEELCG 798 V LF + F AAREK F R+F YS E + +E + ++SLR L++ T+Y +VF +W H A+RV+ ES+LRYGLPP F ++A K K +S L + G Sbjct: 236 VHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPHFNIKIIAVPPKNLSKCKSELIDAFG 349 The following BLAST results are available for this feature:
BLAST of CN182041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182041 ID=CN182041; Name=CN182041; organism=Citrus sinensis; type=EST; length=798bpback to top |