CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECOHS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECODH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO8A (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O8 (strain IAI1) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO24 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SHIB3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metE PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.832e-42
Identity = 92/177 (51.98%), Postives = 110/177 (62.15%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL      A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALKSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium paratuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.832e-42
Identity = 89/179 (49.72%), Postives = 121/179 (67.60%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF  +KV EV  LA+AL   ++      +++ AA ASRKS PR+ N+ V+    ++  S   R      R  +Q  +L+LP LPTTTIGS+PQT  +R+ R   ++ +I + +Y + +K+EI +V+ LQE+L +DVLVHGEPERNDMV+YF EQL GF  T NGWVQSYGSRCV+PP
Sbjct:  345 WLAFGREKVAEVVTLARALRDGREAVADEIAASNAAVASRKSDPRLHNDRVRARIDSIVASGSHRGDPAQRRA-SQDARLHLPPLPTTTIGSYPQTSAIRKARAALRSGEIDQAEYERRMKKEIADVITLQEQLGLDVLVHGEPERNDMVQYFAEQLEGFFATQNGWVQSYGSRCVRPP 522
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.832e-42
Identity = 89/179 (49.72%), Postives = 121/179 (67.60%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF  +KV EV  LA+AL   ++      +++ AA ASRKS PR+ N+ V+    ++  S   R      R  +Q  +L+LP LPTTTIGS+PQT  +R+ R   ++ +I + +Y + +K+EI +V+ LQE+L +DVLVHGEPERNDMV+YF EQL GF  T NGWVQSYGSRCV+PP
Sbjct:  345 WLAFGREKVAEVVTLARALRDGREAVADEIAASNAAVASRKSDPRLHNDRVRARIDSIVASGSHRGDPAQRRA-SQDARLHLPPLPTTTIGSYPQTSAIRKARAALRSGEIDQAEYERRMKKEIADVITLQEQLGLDVLVHGEPERNDMVQYFAEQLEGFFATQNGWVQSYGSRCVRPP 522
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_HAEIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae GN=metE PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.832e-42
Identity = 95/180 (52.78%), Postives = 116/180 (64.44%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQK---DEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WL+F  QKV E+N L +AL+  +     A  +S  AA A   S      E  ++ A   KG+D R++   + R+  Q   LNLP LPTT IGSFPQT ++R  R  FK  ++S  DY   +K+EI  VV+ QEELD+DVLVHGE ERNDMVEYFGE L GFAFT  GWVQSYGSRCVKPP
Sbjct:  343 WLSFTLQKVEELNVLKQALNNGRASVQAALDASQVAADARATSKEIHRPEVAERLANLPKGADQRKSP-FAERIVKQNAWLNLPLLPTTNIGSFPQTTEIRHARASFKKGELSLADYEAAMKKEIEYVVRRQEELDLDVLVHGEAERNDMVEYFGELLDGFAFTKFGWVQSYGSRCVKPP 521
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_ECOHS1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECODH1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO8A1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO451.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO241.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIB31.832e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCPA1.832e-4249.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA11.832e-4249.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIN1.832e-4252.785-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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