CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.331e-42
Identity = 94/180 (52.22%), Postives = 115/180 (63.89%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYF---SSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF  QKV E++ L  AL   +        +S  AA A   S      E  ++ A   K +D R++     R+  Q   LNLP LPTT+IGSFPQT D+RR R  FK   +S ++Y  ++K+EI  VV+ QE+LD+DVLVHGEPERNDMVEYFGE L GFAFT  GWVQSYGSRCVKPP
Sbjct:  344 WLAFTLQKVQELSVLKTALEKGRTAVNVELDASQVAADARANSKEIHRPEVAERLANLPKNADQRKSP-FGERIKLQNAWLNLPLLPTTSIGSFPQTTDIRRARAAFKKGDLSLEEYENSMKKEIELVVREQEKLDLDVLVHGEPERNDMVEYFGELLDGFAFTKFGWVQSYGSRCVKPP 522          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALPK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALNS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella newport (strain SL254) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYHTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALDC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella dublin (strain CT_02021853) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella choleraesuis GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella agona (strain SL483) GN=metE PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.962e-42
Identity = 91/177 (51.41%), Postives = 111/177 (62.71%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +A  QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_PASMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pasteurella multocida GN=metE PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 91/179 (50.84%), Postives = 116/179 (64.80%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKD--EAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF  QKV E+  +  AL   +   +A   ++ AA  +R +S  +    V +  A L     +R +  + R+  Q   LNLP LPTT IGSFPQT+++R+ R +FK  ++S  DY   +K+EI  VV+ QEELD+DVLVHGE ERNDMVEYFGE L GFAFT  GWVQSYGSRCVKPP
Sbjct:  344 WLAFTLQKVQELRVIKTALEQGRGAVQAELDASQAAADARANSKEIHRPEVAERLANLPTDADKRKSPFAERIAKQNAWLNLPLLPTTNIGSFPQTVEIRQARAKFKKGELSVADYEAAMKKEIEFVVRRQEELDLDVLVHGEAERNDMVEYFGELLDGFAFTKFGWVQSYGSRCVKPP 522          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_HAES15.331e-4252.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALSV6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPK6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPB6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALNS6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALDC6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALCH6.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALA46.962e-4251.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PASMU9.093e-4250.845-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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