CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALTI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella typhi GN=metE PE=3 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 2.026e-41
Identity = 90/177 (50.85%), Postives = 110/177 (62.15%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+  +  A    +   QA R+ S RV N AV+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGETAALEEWSVPIQA-RRHSHRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.026e-41
Identity = 93/178 (52.25%), Postives = 117/178 (65.73%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKD-EAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA +K+ EV  LA AL      EA  ++   A  +R+ S  V N  VQK  AA+  +   R +  + R   Q++ L LP LPTTTIGSFPQT  +R+ R  +K  ++   DY++ ++ EI   V+ QEEL +DVLVHGE ERNDMVEYFGEQL G+AFT NGWVQSYGSRCVKPP
Sbjct:  343 WLAFATEKLGEVATLALALRDPAAAEATLAAADRALDARRHSSTVVNALVQKRVAAVSSAMADRQSPFAERNRLQREALGLPLLPTTTIGSFPQTPAIRQARAAYKRGELRALDYLQRMRAEIEIAVRKQEELGLDVLVHGEAERNDMVEYFGEQLWGYAFTENGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.646e-41
Identity = 92/178 (51.69%), Postives = 116/178 (65.17%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQA--SRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            W AFA QK+ EV  LA AL G ++ A  + +  +Q    R+S+  +   AVQ+  AA+  +   RA   S R   Q +KL LP LPTTTIGSFPQT D+R+ R  ++  K++E DYV  +K  I + V+ QE LD+DVLVHGE ERNDMVEYF E L+GF  T  GWVQSYGSRCVKP
Sbjct:  358 WFAFAKQKLREVTLLADALDGNQN-AILACHQYSQPLRERESAEHINKPAVQQRLAAITPALAERAEAYSVRAQHQAEKLGLPLLPTTTIGSFPQTSDIRQQRSAYRTGKLNEQDYVTAMKGHIADAVERQERLDLDVLVHGEAERNDMVEYFAENLNGFQATRFGWVQSYGSRCVKP 534          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.646e-41
Identity = 92/178 (51.69%), Postives = 116/178 (65.17%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQA--SRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            W AFA QK+ EV  LA AL G ++ A  + +  +Q    R+S+  +   AVQ+  AA+  +   RA   S R   Q +KL LP LPTTTIGSFPQT D+R+ R  ++  K++E DYV  +K  I + V+ QE LD+DVLVHGE ERNDMVEYF E L+GF  T  GWVQSYGSRCVKP
Sbjct:  358 WFAFAKQKLREVTLLADALDGNQN-AILACHQYSQPLRERESAEHINKPAVQQRLAAITPALAERAEAYSVRAQHQAEKLGLPLLPTTTIGSFPQTSDIRQQRSAYRTGKLNEQDYVTAMKGHIADAVERQERLDLDVLVHGEAERNDMVEYFAENLNGFQATRFGWVQSYGSRCVKP 534          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.646e-41
Identity = 89/179 (49.72%), Postives = 115/179 (64.25%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKD---EAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            WLAFA QK  EV  L +AL    D   +A    +   +A+R +S R+    VQ   AA++    +R +  + R+  Q++ L LP LPTTTIGSFPQT  +R  R+ FK  K+S  +Y + +  EI + V++QE L +DVLVHGE ERNDMVEYF EQL G+AFT  GWVQSYGSRCVKP
Sbjct:  353 WLAFAVQKCQEVALLGRALEAPDDASVQAALEQSRVVRAARAASTRIHKPEVQARLAAIRPRHAQRQSPFAERIAQQRECLQLPLLPTTTIGSFPQTSAIRLARQSFKQGKLSAAEYTEAMHAEIRHAVEVQENLGLDVLVHGEAERNDMVEYFAEQLDGYAFTRFGWVQSYGSRCVKP 531          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.646e-41
Identity = 91/177 (51.41%), Postives = 109/177 (61.58%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L+ AL+   D A   + +A   SRK S RV N AV +  AA+   D  R      R  AQ+++  LP  PTTTIGSFPQT ++R +R +FK  ++    Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  346 WFAFALQKCSELALLSSALNNN-DPASLEAWSAPIRSRKHSTRVHNAAVGQRLAAISPQDSLRKNRYPVRAKAQRQRFQLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGTHYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFIFTQNGWVQSYGSRCVKPP 521          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.455e-41
Identity = 89/179 (49.72%), Postives = 116/179 (64.80%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA QK  E+  LA+ L    D   +  ++N A  ASR  +    + AV+   AA+  +D RR+   + R  AQ+  L LP LPTTTIGSFPQT +LR  R E +A +I E +Y + +K+EI  V+  QE+  IDVLVHGEPERNDMV+YF EQL G+  T +GWVQSYG+R V+PP
Sbjct:  357 WLAFAKQKTEEIVVLARGLGSGTDAIASELAANRADLASRTGAALTRDPAVRARTAAVTEADGRRSQPYAERSAAQRAGLGLPLLPTTTIGSFPQTTELRTARAELRAGRIDEAEYEERVKDEIREVLSFQEKAGIDVLVHGEPERNDMVQYFAEQLDGYLATQHGWVQSYGTRYVRPP 535          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.455e-41
Identity = 91/177 (51.41%), Postives = 109/177 (61.58%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+          +A  QA RK S RV N AV++   A+   D +RA     R +AQ+ + NLP  PTTTIGSFPQT ++R +R +FK   +   +Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCEELALLRDALNSGDTTKIEQWSAPIQA-RKHSARVHNPAVEQRLKAITPQDSQRAHAYPVRAEAQRARFNLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDAANYRTGIAEHIKQAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.513e-41
Identity = 90/177 (50.85%), Postives = 108/177 (61.02%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSGDTAAVTEWSAPIQA-RRHSTRVHNVGVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANHYRTGIAEHIRQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.513e-41
Identity = 90/180 (50.00%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALS---GQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+   G K +A   + +A   +R+ S RV N+AV +  AA+   D  R      R + Q+++ NLP  PTTTIGSFPQT ++R +R +FK  ++    Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCEELALLTAALNQPDGSK-QAELDAYSAPIRARRESKRVNNQAVTERLAAINPQDSERNQPYLQRAEIQRQRYNLPLWPTTTIGSFPQTTEIRGLRLDFKKGRVDGTSYRTNICEHIKQAINEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 523          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_SALTI2.026e-4150.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP2.026e-4152.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM2.646e-4151.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF12.646e-4151.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY2.646e-4149.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT92.646e-4151.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG3.455e-4149.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS83.455e-4151.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR4.513e-4150.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL4.513e-4150.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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