CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.516e-39
Identity = 86/179 (48.04%), Postives = 111/179 (62.01%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA QK  E+  LAK L    D   A  ++N A   SR  S    + AV+   AA   +D RR+     R  AQ+ +L LP LPTTTIGSFPQT +LR  R + +A +I    Y + I+ EI  V+  QE+  +DVLVHGE ERNDMV+YF E+L+G+  T +GWVQSYG+R V+PP
Sbjct:  357 WLAFARQKTAEIVTLAKGLGHGTDAIAAQLAANRADLVSRADSALTRDPAVRSRTAATTDADARRSGPYPERAAAQRARLGLPLLPTTTIGSFPQTAELRTARADLRAGRIDSAGYEERIRAEIGEVISFQEKAGLDVLVHGEAERNDMVQYFAERLTGYLTTQHGWVQSYGTRYVRPP 535          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_CAMJR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni (strain RM1221) GN=metE PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.410e-39
Identity = 84/175 (48.00%), Postives = 113/175 (64.57%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            +FA +K+ E+  L + L+  ++   F +N   Q   K+ P   +E V+    ALK  D  R  +   R   Q++ L LP LPTTTIGSFPQ+ D+R  R  FK +KIS  +Y +  +++I   +++QEE+ +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYG+RCVKPP
Sbjct:  348 SFAKEKLQELKDLKEILNSSEENPLFRAN---QELFKNIPERLDEKVKARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEKISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWVQSYGTRCVKPP 519          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.229e-38
Identity = 85/178 (47.75%), Postives = 116/178 (65.17%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKD--EAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA QK+ E+  + + LS   +  E   ++   +  + +SS     + VQ A A+LK  D  R      R D QQK L LP LPTTTIGSFPQT ++R+ R++++  +I+ + Y   I++E    ++ QE + +DVLVHGE ER DMVEYFGE+L+GF+FT NGWVQSYGSRCVKPP
Sbjct:  347 LAFANQKLEELTLIKRGLSEGVNSIEIEITTYRNSHEAVRSSAARNRKDVQTARASLKEEDFSRPLPFEQRYDLQQKALQLPLLPTTTIGSFPQTPEVRQTRKQWRNGEITNEQYEHFIEQETEKWIRHQENIGLDVLVHGEFERTDMVEYFGERLAGFSFTKNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.738e-38
Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAK---ALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W+AFA QK+ EV AL K   A    ++     +N  +  +R  S  +  + V+    A++ SD +R +   +R   Q+K L LP +PTTTIGSFPQT ++R  R ++K   I+   Y   +K E+   ++ QE++ IDVLVHGE ERNDMVEYFGEQL G+ F+ NGWVQSYGSRCVKPP
Sbjct:  358 WMAFAKQKLHEVAALKKLNRAPMQSEELRLLKANTESIENRAKSKLIHKQHVKARVKAVQPSDSQRKSLFKSRQQIQEKALQLPLMPTTTIGSFPQTDEVRANRAKYKKGDITLAQYEDFVKTEMTKAIEWQEKIGIDVLVHGEFERNDMVEYFGEQLKGYVFSENGWVQSYGSRCVKPP 537          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.670e-38
Identity = 87/178 (48.88%), Postives = 112/178 (62.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQA--SRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            W AFA QKV EV  L +AL G ++ A  + +  +Q   +RK++  V    VQ     +  S   R+   + R   Q + L LP LPTTTIGSFPQT ++R  R  ++  ++SE DY++ +K  I + VK QE LD+DVLVHGE ERNDMVEYF E L+GF  T  GWVQSYGSRCVKP
Sbjct:  348 WFAFAKQKVTEVALLGRALDGDQN-AILACDTYSQPIKARKTATHVNKPQVQVRLNNITASLAERSAPYAERAAHQAEVLGLPLLPTTTIGSFPQTGEIRVQRSAYRTGQLSESDYIQALKGHIADAVKRQEALDLDVLVHGEAERNDMVEYFAENLAGFQTTKFGWVQSYGSRCVKP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.670e-38
Identity = 87/178 (48.88%), Postives = 112/178 (62.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQA--SRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            W AFA QKV EV  L +AL G ++ A  +    +Q    RK++  V    VQ+   ++  S  +R+   + R   Q + L LP LPTTTIGSFPQT D+R  R  ++  K+S+ +Y + +K  I + VK QE LD+DVLVHGE ERNDMVEYF E L+GF  T  GWVQSYGSRCVKP
Sbjct:  348 WFAFAKQKVTEVALLGRALDGDRN-AILACETYSQPIQDRKTATHVNKPQVQERLNSITASLTQRSAPYAERAAHQAEVLGLPLLPTTTIGSFPQTGDIRVQRSAYRTGKLSQTEYNQALKGHIADAVKRQEALDLDVLVHGEAERNDMVEYFAENLAGFQTTKFGWVQSYGSRCVKP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACC2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain G9842) GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.670e-38
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 3
Query:    6 LAFAAQKVVEV----NALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA QK+ E+    +AL K      +E     N     + +SS     E V+ A  ALK  D  R      R + QQ  L LP LPTTTIGSFPQT ++R+ R+E++   IS + Y K I++E    ++ QEE+ +DVLVHGE ER DMVEYFGE+L+GF+FT NGWVQSYGSRCVKPP
Sbjct:  347 LAFANQKLEELVLIHSALTKGTESISNELETYRNV--HHTIRSSAVRNREDVKAARTALKEEDFSRPLPFEKRYELQQVALELPLLPTTTIGSFPQTTEVRQTRKEWRNGVISNEQYEKFIEKETEKWIRYQEEIGLDVLVHGEFERTDMVEYFGERLAGFSFTKNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACC1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.966e-38
Identity = 85/178 (47.75%), Postives = 113/178 (63.48%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA QK+ E+  +  AL+   +  +    +      + +SS     E V+ A  ALK  D  R      R + QQ  L LP LPTTTIGSFPQT ++R+ R+E++   IS + Y + I++E    ++ QEE+ +DVLVHGE ER DMVEYFGE+L+GF+FT NGWVQSYGSRCVKPP
Sbjct:  347 LAFANQKLEELVLIHSALTQGTESIHNELETYRNVHHTIRSSAARNREDVKAARTALKEEDFSRPLPFEKRYELQQVALKLPLLPTTTIGSFPQTTEVRQTRKEWRNGVISNEQYEQFIEKETEKWIRYQEEIGLDVLVHGEFERTDMVEYFGERLAGFSFTKNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.359e-37
Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY---FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AF  QK  E+  L  AL+   D  Y    +  +A   +R++S +V N  V+     +  +  +R  +   R++ Q+ + NLP LPTTTIGSFPQT  +R +R + K+ +I  + Y   I   I   +  Q+ L +DVLVHGE ERNDMVEYFGE L+GF FT NGWVQSYGSRCVKPP
Sbjct:  346 WFAFTIQKCNELKLLCNALNRLDDTKYQAILADYSAPLWARQTSEKVHNRQVKIRTEQITENHSQRQQHYLDRINVQRARFNLPILPTTTIGSFPQTTAIRSLRLDLKSGRIDNEYYKNAICNHIKQAITEQDALGLDVLVHGEAERNDMVEYFGEHLNGFIFTQNGWVQSYGSRCVKPP 525          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.359e-37
Identity = 86/179 (48.04%), Postives = 116/179 (64.80%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQK---DEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA +K+ E++ L +  +G +    EA  +++ A  A  KS  R        AA +    + +R  + + R   Q++K  LP LPTTTIGSFPQT D+RR R  ++  ++S  +Y +T+K  I   + +QEEL +DVLVHGE ERNDMVE+FGE+L GFAFT NGWVQSYGSRCVKPP
Sbjct:  346 LAFANEKLTELHTLKQLAAGNEAEVKEALEANDDALAALEKSGWR------SGAATSHNLENKKRPQSFNERRPLQEEKWQLPLLPTTTIGSFPQTKDVRRTRSLWRKGELSTVEYERTMKSYIEKWINIQEELGLDVLVHGEFERNDMVEFFGEKLDGFAFTANGWVQSYGSRCVKPP 518          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_STRAW5.516e-3948.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJR9.410e-3948.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN1.229e-3847.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH32.738e-3846.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA4.670e-3848.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB4.670e-3848.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC24.670e-3849.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC17.966e-3847.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH1.359e-3745.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD1.359e-3748.045-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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