CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.150e-36
Identity = 85/176 (48.30%), Postives = 111/176 (63.07%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAA-QASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ EV  +A  +    D    S+  AA QA    S  V +E V+   AAL  +D+ R      R   Q++ L LP LPTTTIGSFPQT  +R  R   +  +IS+  Y + I+ +I++VV  QE++ +DVLVHGE ERNDMVEYFG+ L+GF FT N WVQSYG+RCVKPP
Sbjct:  356 AFAVEKLEEVREIADLMQLDDDAKRQSTALAANQALFDGSRVVADEVVRARIAALADADYVRRPERGERQRLQREALGLPLLPTTTIGSFPQTKQVRAERARLRKGEISQGQYDEFIRRQIDDVVAKQEQIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPP 531          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 82/176 (46.59%), Postives = 112/176 (63.64%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNE-AVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA QK+ E+  +A      +DE   S+  AA  +     RV  + AV +    L  +D+ R      R   Q++ L LP LPTTTIGSFPQT ++R  R + +  +++++ Y + IK +I+ V+K QEE+ +DVLVHGE ERNDMVEYFG+ L+GF FT N WVQSYG+RCVKPP
Sbjct:  355 AFAVQKLDELKEVAALADATEDEKKASAALAANQALFDGTRVAADPAVAERIGKLSDADYVRQPAREERQALQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIKAQIDAVIKKQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPP 530          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 82/176 (46.59%), Postives = 112/176 (63.64%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNE-AVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA QK+ E+  +A      +DE   S+  AA  +     RV  + AV +    L  +D+ R      R   Q++ L LP LPTTTIGSFPQT ++R  R + +  +++++ Y + IK +I+ V+K QEE+ +DVLVHGE ERNDMVEYFG+ L+GF FT N WVQSYG+RCVKPP
Sbjct:  355 AFAVQKLDELKEVAALADATEDEKKASAALAANQALFDGTRVAADPAVAERIGKLSDADYVRQPAREERQALQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIKAQIDAVIKKQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPP 530          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 86/180 (47.78%), Postives = 115/180 (63.89%), Query Frame = 3
Query:    6 LAFAAQKVVEV----NALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA QK+ E+    +AL K +     +     NA   A R S+ R   E V+ A  +LK  D  R      R + QQ  L LP LPTTTIGSFPQT ++R+ R++++   I+ + Y + I++E    ++ QE++ +DVLVHGE ER DMVEYFGE+L+GF+FT NGWVQSYGSRCVKPP
Sbjct:  347 LAFANQKLEELVLIHSALTKGVESISSDLTTYRNAH-HAIRSSAAR-NREDVKVARTSLKEDDFSRPLPFEKRYELQQVALQLPLLPTTTIGSFPQTSEVRQTRKQWRNGDITNEQYNQFIEKETAKWIRYQEDIGLDVLVHGEFERTDMVEYFGERLAGFSFTKNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACHK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=metE PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 84/178 (47.19%), Postives = 111/178 (62.36%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA QK+ E+  +  AL+   +       +      + +SS     E V+ A  ALK  D  R      R + QQ  L LP LPTTTIGSFPQT ++R+ R+E++   IS + Y + I++E    ++ QEE+ +DVLVHGE ER DMVEYF E+L+GF+FT NGWVQSYGSRCVKPP
Sbjct:  347 LAFANQKLEELVLIHSALTQGTESISNELETYRNVHHTIRSSAARNREDVKAARTALKEEDFSRPLPFEKRYELQQVALKLPLLPTTTIGSFPQTTEVRQTRKEWRNGIISNEQYEQFIEKETEKWIRYQEEIGLDVLVHGEFERTDMVEYFSERLAGFSFTKNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 88/180 (48.89%), Postives = 114/180 (63.33%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQ----KDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKP 530
            WL+FA QK  E   +A+AL G     ++ A +S+   A+A+   S  V N  V++   A+  +   R    + R   Q+  LNLP LPTTTIGSFPQT ++R  RR+FKA  ++E DY   +K  I + ++ QE+LD+DV VHGE ERNDMVEYF E L GFA T  GWVQSYGSRCVKP
Sbjct:  351 WLSFAKQKCREF-LVAQALDGNAIAIQECAKYSAPIKARAT---SALVNNPDVRQRTNAITAALAERTAPYAERTRQQRAALNLPLLPTTTIGSFPQTNEIRTQRRDFKAGYLTEADYNTALKGHIADAIQRQEDLDLDVFVHGEAERNDMVEYFAELLEGFAVTRFGWVQSYGSRCVKP 526          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ACICJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=metE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.347e-36
Identity = 86/180 (47.78%), Postives = 109/180 (60.56%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALS---GQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA QK+ EV  +A+ L    G   EA  +S+AA + +R+ S RV    V            RR    +AR   Q+++L LP  PTTTIGS PQT  +RR R      +I   +Y + I     + ++LQE + +DVLVHGE ERNDMV+YFGEQL GFAFT +GWVQSYGSRCV PP
Sbjct:  351 WLAFATQKLAEVATIARGLDEGEGAIAEALEASDAALR-TRRDSARVHRTDVAARLLGATPEMERRPAPHAARRARQRQRLPLPAFPTTTIGSLPQTSGVRRTRAALARGEIGAAEYDEAIATWTEDAIRLQERIGLDVLVHGEFERNDMVKYFGEQLDGFAFTRHGWVQSYGSRCVAPP 529          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.371e-36
Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGS--DHR---RATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +++ E+  L +A++          + AA  +RKS   + +E   KA    K S  D +   R      R   Q   L LP  PTTTIGSFPQT ++R+ R ++K  KI+E++Y K I +EI   VK+QEELDIDVLVHGE ER DMVE+F E+L GFA T NGWVQSYGSRCV+PP
Sbjct:  343 LSFANERLEELTILKRAIN----------DGAALPARKS---IVHEIFSKAEVRSKISSIDEKAILRKPEFQERYRMQMDSLKLPLFPTTTIGSFPQTKEVRKFRADYKNGKITEEEYKKFIFQEIEKAVKIQEELDIDVLVHGEFERTDMVEFFAEKLKGFAITKNGWVQSYGSRCVRPP 510          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.709e-36
Identity = 85/177 (48.02%), Postives = 115/177 (64.97%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSS-NAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA QK+ E   L+KAL+G+ +++   +     Q   K SP   NE V+    ALK +D RR+ +   RLD Q K   LP  PTTTIGSFPQT  +R++R  +K  ++++ +Y+  I   I   + LQE + +DVLVHGE ER+DMVEYFGEQL G+ FT +GWVQSYGSR V+PP
Sbjct:  340 LSFAEQKLEETVLLSKALTGKSNKSEIENIEIYWQEFYKFSP--ANEKVKSQIKALKETDFRRSMSYLERLDNQIK---LPAFPTTTIGSFPQTKQVRKLRARYKKGELTQAEYLAQIDANIAYCIGLQEGMGMDVLVHGEFERSDMVEYFGEQLDGYTFTTHGWVQSYGSRYVRPP 511          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.709e-36
Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNE-AVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA QK+ E+  +A      +DE   S+  AA  +     RV  + AV +    L  +D+ R      R   Q++ L LP LPTTTIGSFPQT ++R  R + +  +++++ Y + I  +I+ V++ QEE+ +DVLVHGE ERNDMVEYFG+ L+GF FT N WVQSYG+RCVKPP
Sbjct:  355 AFAVQKLGELKEIAALTDATEDEKKSSAALAANQALFDGTRVAADPAVAERIGKLSDADYVRQPAREERQSLQREALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEVTKEAYDEFIASQIDAVIRKQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPP 530          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_BIFA01.150e-3648.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO1.502e-3646.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD1.502e-3646.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK1.502e-3647.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHK1.502e-3647.195-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR1.962e-3648.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACICJ3.347e-3647.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD4.371e-3648.075-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_TRIEI5.709e-3648.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI5.709e-3645.455-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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