CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain N315) GN=metE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L+      Y    A  +       R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLLNQNDSVKYDKLKARYE-------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAAM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metE PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L+      Y    A  +       R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLLNQNDSVKYDKLKARYE-------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAA9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH9) GN=metE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L+      Y    A  +       R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLLNQNDSVKYDKLKARYE-------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH1) GN=metE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L+      Y    A  +       R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLLNQNDSVKYDKLKARYE-------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L+      Y    A  +       R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLLNQNDSVKYDKLKARYE-------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 82/178 (46.07%), Postives = 105/178 (58.99%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKD--EAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K++E+  L   L   K   +A            K     TN A  +    L   D +R T    RL  Q   L LP LPTTTIGSFPQT D+R  R++++ K+ S++ Y   I+EE    + +QE+L +DVLVHGE ER DMVEYFGE+L GFAFT   WVQSYGSRCV+PP
Sbjct:  347 LSFAKEKLLELTLLKNGLVSGKAAIQAEIDEAHGHLQDLKQYGAATNSAFAEERGKLTEEDFKRPTAFEERLRIQNDSLGLPLLPTTTIGSFPQTADVRSARQKWRKKEWSDEQYEAFIQEETKKWIDIQEDLGLDVLVHGEFERTDMVEYFGEKLGGFAFTKYAWVQSYGSRCVRPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36
Identity = 85/176 (48.30%), Postives = 111/176 (63.07%), Query Frame = 3 
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +G   EA      AA     ++ RV   A  +A  A L  +D+ R    + R + Q K LNLP LPTTTIGSFPQT ++R  R  F+  ++S++DY K + E+I+  +K QEE+  DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGGGAEAL-----AANKELFATERVGENAELRARIAGLTDADYTRLPVFAEREEIQHKTLNLPPLPTTTIGSFPQTKEVRAKRLAFRKGELSQEDYDKFLAEQIDEWIKWQEEVGFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MW2) GN=metE PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L  Q D   +    A         R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRR-LFNQNDSVKYDKLKARYE------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAAT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metE PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L  Q D   +    A         R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRR-LFNQNDSVKYDKLKARYE------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAAS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=metE PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 3 
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L  Q D   +    A         R  N++ +      +     R +  + R++ QQK+LNLP+LPTTTIGSFPQ+ ++R+ R ++K K+I+++ Y   +K EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRR-LFNQNDSVKYDKLKARYE------RFQNQSFKNLDYDFESVRTSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFLKNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_STAAN7.456e-3644.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAM7.456e-3644.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA97.456e-3644.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA27.456e-3644.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA17.456e-3644.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACLD7.456e-3646.075-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV9.738e-3648.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAW1.661e-3544.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAT1.661e-3544.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAS1.661e-3544.895-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
back to top