CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.555e-33
Identity = 78/176 (44.32%), Postives = 110/176 (62.50%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL + L  Q D A +    A         R  +++ +            R +    R  AQ  +L+LP+LPTTTIGSFPQT ++R+ R ++K K+IS++ Y   ++ EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRR-LFNQNDSAKYDKLKARYE------RFQSQSFKNLEYDFDSVPTSRKSPFPERKKAQDARLHLPDLPTTTIGSFPQTQEVRKYRADWKNKRISDEAYNNFLESEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.030e-33
Identity = 80/176 (45.45%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +GQ  EA      AA     ++ RV   A  +A  A L  +D+ R    + R   Q++   LP LPTTTIGSFPQT ++R  R  ++  ++S+ +Y   + E I+  +K QE++D DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGQGSEAL-----AANKELFATERVGENAELRARIAGLTDADYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.030e-33
Identity = 80/176 (45.45%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +GQ  EA      AA     ++ RV   A  +A  A L  +D+ R    + R   Q++   LP LPTTTIGSFPQT ++R  R  ++  ++S+ +Y   + E I+  +K QE++D DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGQGSEAL-----AANKELFATERVGENAELRARIAGLTDADYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.030e-33
Identity = 80/176 (45.45%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +GQ  EA      AA     ++ RV   A  +A  A L  +D+ R    + R   Q++   LP LPTTTIGSFPQT ++R  R  ++  ++S+ +Y   + E I+  +K QE++D DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGQGSEAL-----AANKELFATERVGENAELRARIAGLTDTDYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.030e-33
Identity = 80/176 (45.45%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +GQ  EA      AA     ++ RV   A  +A  A L  +D+ R    + R   Q++   LP LPTTTIGSFPQT ++R  R  ++  ++S+ +Y   + E I+  +K QE++D DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGQGSEAL-----AANKELFATERVGENAELRARIAGLTDADYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.030e-33
Identity = 84/179 (46.93%), Postives = 111/179 (62.01%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFS---SNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA QK+ E+  L KAL+   +        + AA  A  +SS R  N  VQ+A A L      R    + R+  Q   LNLP  PTTTIGSFPQ+ ++R+ R ++    I++ +Y   I++E    +K+QEELDIDVLVHGE ER DMVEYFG++L+GF  T  GWVQSYGSR V+PP
Sbjct:  349 LSFADQKLDEIAILTKALTDGAESVTAELEDARAAVTALNESSHR-NNLEVQEAIANLGNVRVDRELPFAERIKLQHAWLNLPLFPTTTIGSFPQSPEVRKTRADWLKGNITDAEYNAFIEKETARWIKIQEELDIDVLVHGEFERTDMVEYFGQKLAGFQATKFGWVQSYGSRAVRPP 526          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.523e-33
Identity = 80/176 (45.45%), Postives = 107/176 (60.80%), Query Frame = 3
Query:    9 AFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAA-AALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            AFA +K+ E+  L    +GQ  EA      AA     ++ RV   A  +A  A L   D+ R    + R   Q++   LP LPTTTIGSFPQT ++R  R  ++  ++S+ +Y   + E I+  +K QE++D DVLVHGE ERNDMVEYFG+ LSG+ F+ NGWVQSYG R VKPP
Sbjct:  344 AFAVEKLDEIRDLDAIRNGQGSEAL-----AANKELFATERVGENAELRARIAGLTDVDYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPP 514          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_THESQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga sp. (strain RQ2) GN=metE PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.908e-33
Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA +K+ E+  L   L G+  +    S        ++  RV N         L     RR    + R   Q+++LNLP  PTTTIGSFPQT ++R++R +++  +IS+++Y   IKE+I   ++LQEE+ +DVLVHGE ER DMVE+F E+L+G A T NGWV SYGSRC +PP
Sbjct:  332 LAFAKEKLEELKMLKDFLEGKTFDLPNVSFEDFAVDLQAVERVRN---------LPEDSFRREKEYTERDRIQRERLNLPLFPTTTIGSFPQTPEVRKMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEFFAEKLNGIATTQNGWVLSYGSRCYRPP 498          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_THEMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga maritima GN=metE PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.908e-33
Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            LAFA +K+ E+  L   L G+  +    S        ++  RV N         L     RR    + R   Q+++LNLP  PTTTIGSFPQT ++R++R +++  +IS+++Y   IKE+I   ++LQEE+ +DVLVHGE ER DMVE+F E+L+G A T NGWV SYGSRC +PP
Sbjct:  332 LAFAKEKLEELKMLKDFLEGKTFDLPNVSFEDFAVDLQAVERVRN---------LPEDSFRREKEYTERDRIQRERLNLPLFPTTTIGSFPQTPEVRKMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEFFAEKLNGIATTQNGWVLSYGSRCYRPP 498          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.908e-33
Identity = 73/176 (41.48%), Postives = 110/176 (62.50%), Query Frame = 3
Query:    6 LAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            L+FA +K+ E++AL +  +      Y    A  +       R  +++ +      +     R +  + R   Q ++LNLP+LPTTTIGSFPQT ++R+ R ++K  +I++ +Y + ++ EI   +K+QE++ +DVLVHGE ERNDMVE+FGE+L GF  T  GWVQSYGSR VKPP
Sbjct:  341 LSFATEKLDELDALRRLFNDNDLSKYEHYKARYE-------RFQSQSFKNLEYDFESVPTHRKSPFAKRKQLQNQRLNLPDLPTTTIGSFPQTREIRKFRADWKNNRITDAEYQEFLQNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPP 509          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_STAHJ1.555e-3344.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR62.030e-3345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN2.030e-3345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI2.030e-3345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP22.030e-3345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO2.030e-3346.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP44.523e-3345.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THESQ5.908e-3343.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEMA5.908e-3343.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ5.908e-3341.485-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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