CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 177.948 bits (450), Expect = 2.557e-44
Identity = 92/177 (51.98%), Postives = 117/177 (66.10%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            + +FA QK+ EV  + K +SGQ   A   +NA +  SR  S  + + AV+   A++      RA     RL  QQK  NLP  PTTTIGSFPQT D+R  R +F    IS ++Y K I  EI  V++ QEE+ +DVLVHGEPERNDMV+YFGEQ++G+AFTVNGWVQSYGSR V+PP
Sbjct:  357 FFSFATQKLDEVVVITKNVSGQDVAAALEANAKSVESRGKSKFIHDAAVKARVASIDEKMSTRAAPFEQRLPEQQKVFNLPLFPTTTIGSFPQTKDIRINRNKFNKGTISAEEYEKFINSEIEKVIRFQEEIGLDVLVHGEPERNDMVQYFGEQINGYAFTVNGWVQSYGSRYVRPP 533          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_FLAJ1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=metE PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.557e-44
Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQ---KDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA QK+ EV  L +  SG+   K+ A +  N  A  +RK+S  + N  V+   A +  +D +R +  ++R  +Q K LNLP  PTTTIGSFPQT ++R  R +FK  +++ + Y   I++E    ++ QEE  IDVLVHGE ERNDMVEYFGEQL GF FT NGWVQSYGSRCVKPP
Sbjct:  355 WLAFAKQKINEVVLLKQFASGEVNPKNSADYERNVIANENRKTSKLIHNNEVKARTAGITAADDKRKSAFASRRKSQIKALNLPLFPTTTIGSFPQTTEVRSWRAKFKKGELTTEQYNDLIEKETEAAIRFQEETGIDVLVHGEFERNDMVEYFGEQLDGFTFTKNGWVQSYGSRCVKPP 534          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_RUTMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=metE PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.339e-44
Identity = 91/179 (50.84%), Postives = 124/179 (69.27%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALS-GQKDEAY-FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WL FA QK+ E++ LA+AL+ GQ       ++N  A  S+K SP V N  V++  A +      R ++  +R   Q +K NLP  PTTTIGSFPQT+++R+ R ++K  K+S + Y++T++ EI   V++QE L +DVLVHGEPERNDMVEYFG+QLSG+ F+  GWVQSYGSRCVKPP
Sbjct:  347 WLGFAVQKLEELSLLAQALNQGQASVTKEIANNIDAINSKKYSPLVHNAKVKERIAKVNDELGNRQSDYKSRTKLQSEKFNLPLYPTTTIGSFPQTLEIRQARHDYKLGKLSAEQYMQTMRSEIRYCVQVQEHLGLDVLVHGEPERNDMVEYFGQQLSGYVFSQFGWVQSYGSRCVKPP 525          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.339e-44
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY---FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA +K+ E++ L +AL+ Q D       +++ AAQASR++S RV    VQ+  AA+      RA+  + R++ Q++ L LP LPTTTIGSFPQT  +R+ R  FK  +I   +Y++ I+ EI   V+ QE L +DVLVHGE ERNDMVEYFGEQL G+ FT NGWVQSYGSRCVKPP
Sbjct:  343 WLAFATEKLDELSVLGRALN-QSDAVVAEALAASDAAQASRRASRRVVKPRVQQRLAAVSAGMADRASPFAERIERQRQALQLPLLPTTTIGSFPQTAAIRQTRAAFKRGEIGALEYLERIRAEIAVAVRKQEALGLDVLVHGEAERNDMVEYFGEQLCGYGFTENGWVQSYGSRCVKPP 521          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.339e-44
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFAAQK  EV AL  AL   +    A F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP LPTTTIGSFPQT ++RR R  FK   +    Y++ ++E++   +  Q    +DVLVHGE ERNDMVEYFGE L GFA T NGWVQSYGSRCVKPP
Sbjct:  346 WLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASTYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BUCAP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metE PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.339e-44
Identity = 92/177 (51.98%), Postives = 119/177 (67.23%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W +FA QK  E++ L+KAL+ + D        ++   R  S RV    VQ   + +   + +R+ + + R   Q+KK NLP LPTTTIGSFPQT+ +R++RR++K   I++ DY   IK+ I  V+K QE+L IDVLVHGEPERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  344 WFSFAVQKCTELSLLSKALN-KNDTDSIQKWCSSIYERNFSKRVQKIEVQNRLSEILNVNFKRSDSYNIRSREQKKKFNLPILPTTTIGSFPQTLQIRKLRRDYKQGLINDVDYEIGIKKHIKEVIKEQEKLGIDVLVHGEPERNDMVEYFGENLDGFIFTDNGWVQSYGSRCVKPP 519          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.361e-44
Identity = 93/177 (52.54%), Postives = 118/177 (66.67%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF ++K+ EV  LA AL+G  D A F + +AA ASR++SPR T    Q+     +GS + R T        Q+K L LP LPTTTIGSFPQT  +R  R   + + I+ + Y + ++EEI+ V+  QEEL +DVLVHGEPERNDMV+YF E L GF  T NGWVQSYGSRCV+PP
Sbjct:  339 WLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPR-TAPITQELPGRSRGSFNTRVT-------LQEKSLELPALPTTTIGSFPQTPSIRSARARLRKESITLEQYEEAMREEIDLVIAKQEELGLDVLVHGEPERNDMVQYFSELLDGFLSTANGWVQSYGSRCVRPP 507          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.695e-44
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFAAQK  EV AL  AL   +    A F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP LPTTTIGSFPQT ++RR R  FK   +    Y++ ++E++   +  Q    +DVLVHGE ERNDMVEYFGE L GFA T NGWVQSYGSRCVKPP
Sbjct:  346 WLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BURP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=metE PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.695e-44
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFAAQK  EV AL  AL   +    A F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP LPTTTIGSFPQT ++RR R  FK   +    Y++ ++E++   +  Q    +DVLVHGE ERNDMVEYFGE L GFA T NGWVQSYGSRCVKPP
Sbjct:  346 WLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPP 524          
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_BURP0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=metE PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.695e-44
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 3
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFAAQK  EV AL  AL   +    A F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP LPTTTIGSFPQT ++RR R  FK   +    Y++ ++E++   +  Q    +DVLVHGE ERNDMVEYFGE L GFA T NGWVQSYGSRCVKPP
Sbjct:  346 WLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPP 524          
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_YEAST2.557e-4451.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_FLAJ12.557e-4451.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RUTMC3.339e-4450.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU3.339e-4452.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP63.339e-4453.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAP3.339e-4451.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB4.361e-4452.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS5.695e-4453.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP15.695e-4453.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP05.695e-4453.635-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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