CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 7.438e-44
Identity = 93/177 (52.54%), Postives = 117/177 (66.10%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF ++K+ EV  LA AL+G  D A F + +AA ASR++SPR T    Q+     +GS   R T        Q+K L LP LPTTTIGSFPQT  +R  R   + + I+ + Y + ++EEI+ V+  QEEL +DVLVHGEPERNDMV+YF E L GF  T NGWVQSYGSRCV+PP
Sbjct:  339 WLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPR-TAPITQELPGRSRGSFDTRVT-------LQEKSLELPALPTTTIGSFPQTPSIRSARARLRKESITLEQYEEAMREEIDLVIAKQEELGLDVLVHGEPERNDMVQYFSELLDGFLSTANGWVQSYGSRCVRPP 507
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.715e-44
Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF A+KV EV  LA+AL    D      +S+ AA ASRK  PR+ N  ++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E +YV+ +++EI  V+ LQE L +DVLVHGEPERNDMV+YF EQL+GF  T NGWVQSYGSRCV+PP
Sbjct:  349 WLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPP 526
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.715e-44
Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF A+KV EV  LA+AL    D      +S+ AA ASRK  PR+ N  ++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E +YV+ +++EI  V+ LQE L +DVLVHGEPERNDMV+YF EQL+GF  T NGWVQSYGSRCV+PP
Sbjct:  349 WLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPP 526
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.715e-44
Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF A+KV EV  LA+AL    D      +S+ AA ASRK  PR+ N  ++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E +YV+ +++EI  V+ LQE L +DVLVHGEPERNDMV+YF EQL+GF  T NGWVQSYGSRCV+PP
Sbjct:  349 WLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPP 526
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.715e-44
Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAF A+KV EV  LA+AL    D      +S+ AA ASRK  PR+ N  ++    A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQT  +R  R   +A +I E +YV+ +++EI  V+ LQE L +DVLVHGEPERNDMV+YF EQL+GF  T NGWVQSYGSRCV+PP
Sbjct:  349 WLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQTSAIRVARAALRAGEIDEAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPP 526
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.715e-44
Identity = 93/177 (52.54%), Postives = 115/177 (64.97%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+   D A   + +A   +R+ S RV N AV+K  AA+   D +RA+  +AR  AQ+ + NLP+ PTTTIGSFPQT ++R +R +FK   +  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCGELALLRDALNSG-DTAKLEAWSAPIQARRHSTRVHNAAVEKRLAAITAQDSQRASPYAARAQAQRNRFNLPSWPTTTIGSFPQTTEIRGLRLDFKKGNLDANHYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_HAHCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=metE PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.269e-43
Identity = 91/179 (50.84%), Postives = 117/179 (65.36%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAY--FSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            WLAFA QK+ EV  LA ALS  ++        N    +SRK SPRV N AV++A  A+      R ++   R   Q ++L LP  PTTTIGSFPQT D+R  RR ++  ++ +++Y   +++EI   V+ QE L +DVLVHGE ERNDMVEYFGEQL G+ F+  GWVQSYGSRCVKPP
Sbjct:  346 WLAFALQKLDEVKILATALSEGRNTVADALKENQDCVSSRKHSPRVHNPAVKEAVEAITAEMGDRRSDYQTRAARQAQRLQLPAFPTTTIGSFPQTADIRNARRRYRQGELQDNEYRTLMQQEIERCVREQENLGLDVLVHGEAERNDMVEYFGEQLDGYVFSQFGWVQSYGSRCVKPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.657e-43
Identity = 91/179 (50.84%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L +AL+   D   A  ++ +A   +R+SS RV N  V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT ++R +R +FK  ++   +Y   I E I + +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 523
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.657e-43
Identity = 91/179 (50.84%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L +AL+   D   A  ++ +A   +R+SS RV N  V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT ++R +R +FK  ++   +Y   I E I + +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 523
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.657e-43
Identity = 91/179 (50.84%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L +AL+   D   A  ++ +A   +R+SS RV N  V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT ++R +R +FK  ++   +Y   I E I + +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 523
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_CORGL7.438e-4452.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU9.715e-4452.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA9.715e-4452.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP9.715e-4452.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO9.715e-4452.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CITK89.715e-4452.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAHCH1.269e-4350.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP1.657e-4350.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN1.657e-4350.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE1.657e-4350.845-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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