CN182036

Overview
NameCN182036
Unique NameCN182036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECOSM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 92/177 (51.98%), Postives = 112/177 (63.28%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A  + +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAAWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 92/177 (51.98%), Postives = 112/177 (63.28%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A  + +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAAWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLCDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QKV E   L + L   ++   A    N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP  PTTTIGSFPQT  +R +RR++K  KI +  Y + I++EI  V+ +Q +L +DVLVHGEPERNDMVEYFGE L G A T NGWVQSYGSRCVKPP
Sbjct:  346 WFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKLGLDVLVHGEPERNDMVEYFGELLDGIAITSNGWVQSYGSRCVKPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QKV E   L + L   ++   A    N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP  PTTTIGSFPQT  +R +RR++K  KI +  Y + I++EI  V+ +Q +L +DVLVHGEPERNDMVEYFGE L G A T NGWVQSYGSRCVKPP
Sbjct:  346 WFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKLGLDVLVHGEPERNDMVEYFGELLDGIAITSNGWVQSYGSRCVKPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QKV E   L + L   ++   A    N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP  PTTTIGSFPQT  +R +RR++K  KI +  Y + I++EI  V+ +Q +L +DVLVHGEPERNDMVEYFGE L G A T NGWVQSYGSRCVKPP
Sbjct:  346 WFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVNERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSKIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKLGLDVLVHGEPERNDMVEYFGELLDGIAITSNGWVQSYGSRCVKPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.074e-42
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QKV E   L + L   ++   A    N     SRK+S R+ N  V+K AA++     RR    S R + Q  +LNLP  PTTTIGSFPQT  +R +RR++K  KI +  Y + I++EI  V+ +Q +L +DVLVHGEPERNDMVEYFGE L G A T NGWVQSYGSRCVKPP
Sbjct:  346 WFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKRIHNPNVEKKAASVTERLMRRQHEHSIRKNKQTAQLNLPLFPTTTIGSFPQTSQIRCLRRDYKQGKIDDALYEEKIRQEIAEVIGIQVKLGLDVLVHGEPERNDMVEYFGELLDGIAITSNGWVQSYGSRCVKPP 524
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 90/179 (50.28%), Postives = 114/179 (63.69%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDE--AYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L +AL+   +   A  ++ +A   +R++S RV N  V++  AA+   D  R     AR  AQ+K+ NLP  PTTTIGSFPQT ++R +R +FK  ++   +Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCAELALLTQALNAPSEAKLAELAAYSAPIRARRASSRVHNPQVEQRLAAITAQDIERQQPYEARAAAQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKQAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 523
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SHISS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella sonnei (strain Ss046) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
[Close]
BLAST of CN182036 vs. ExPASy Swiss-Prot
Match: METE_SHIFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella flexneri GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.403e-42
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 3 
Query:    3 WLAFAAQKVVEVNALAKALSGQKDEAYFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPNLPTTTIGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPP 533
            W AFA QK  E+  L  AL+     A    +A  QA R+ S RV N AV+K  AA+   D +RA     R +AQ+ +  LP  PTTTIGSFPQT ++R +R +FK   +  ++Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L GF FT NGWVQSYGSRCVKPP
Sbjct:  345 WFAFALQKCHELALLRDALNSGDTAALAEWSAPIQA-RRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPP 520
The following BLAST results are available for this feature:
BLAST of CN182036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
METE_ECOSM1.074e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I1.074e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO571.074e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU1.074e-4251.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN1.074e-4251.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB21.074e-4251.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB11.074e-4251.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE81.403e-4250.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHISS1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIFL1.403e-4251.985-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182036 ID=CN182036; Name=CN182036; organism=Citrus sinensis; type=EST; length=534bp
GCTGGCTTGCATTTGCTGCACAGAAAGTAGTTGAAGTAAATGCATTGGCC
AAGGCATTGTCTGGGCAAAAGGATGAGGCATACTTCTCTTCTAATGCTGC
AGCTCAGGCTTCAAGAAAATCCTCCCCAAGGGTGACAAATGAGGCTGTCC
AAAAGGCTGCTGCTGCTTTGAAGGGTTCTGACCATCGCCGAGCCACAAAT
GTCAGTGCTAGGTTGGATGCTCAGCAGAAGAAGTTGAACTTGCCAAATCT
TCCTACCACCACCATTGGATCTTTCCCACAAACGATGGATCTCAGAAGAG
TCCGTCGTGAATTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAG
ACTATCAAGGAGGAAATCAACAACGTTGTCAAGCTCCAGGAAGAGCTTGA
CATTGATGTTTTGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGT
ACTTCGGTGAGCAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTT
CAATCTTATGGCTCCCGCTGTGTCAAGCCTCCTA
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