CN182030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 2.387e-31 Identity = 43/119 (36.13%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 206 HDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAY 562 ++ F+H +R +Q ++I+ S VLGYSG + R +P+V+ P V VGL + GFPL+G C+EIG+ ++L+ I YL+++ +H I +A+ + + W A +LT GAY Sbjct: 269 NNNFKHIMRELQGAIIIGSAFQAVLGYSGLMSLILRLVNPVVVAPTVAAVGLSFYSYGFPLVGKCLEIGVVQILLVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFLLTETGAY 387 HSP 2 Score: 65.4698 bits (158), Expect = 2.387e-31 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIN 174 +VP MGG H + V+ ++LF+SG+ TLL T FG+RLP ++GPS F P L+IIN Sbjct: 204 IVPAMGGSHEEVANVVSTVLFVSGITTLLHTSFGSRLPLIQGPSFVFLAPALAIIN 259
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.096e-29 Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 197 HLMHDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYN 565 +L +FR T+R +Q ++IV S +LG+SG L RF +P+V+ P V VGL F GFP G CVEI +P+++LL I YL+ + H + +A+ + WT+A LT GAY+ Sbjct: 271 NLTEHKFRDTMRELQGAIIVGSLFQCILGFSGLMSLLLRFINPVVVAPTVAAVGLAFFSYGFPQAGTCVEISVPLILLLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYD 393 HSP 2 Score: 53.9138 bits (128), Expect = 6.096e-29 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 1 Query: 7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIN 174 +VP M G D VI ++L ++G+ T+L FGTRLP V+G S + PVL +IN Sbjct: 210 IVPAMDGSDKDTASVISTMLLLTGVTTILHCYFGTRLPLVQGSSFVYLAPVLVVIN 265
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.600e-26 Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 2 Query: 209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586 +RF T+R+IQ +LI++ +++ + G N+ RF SP+ I P V GLGL+ GFPL V+ G PM+ C +R+ ++ CI V W FA +LT++G Y++ P T+ Sbjct: 144 ERFVRTMRSIQGALIITGCFQVLVCFLGVWRNIVRFLSPLSIAPLVTFTGLGLYHIGFPL----VKKG-PMIWDGNRC---------------DRYGMMLCIPVVWLFAQLLTSSGVYDHKPQTTQ 249 HSP 2 Score: 67.3958 bits (163), Expect = 7.600e-26 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171 LVPLMGGG + +VIQ+LLF+SGL TL Q+ FGTRLP + S A+ +P+ SII Sbjct: 77 LVPLMGGGDAEKVKVIQTLLFVSGLTTLFQSFFGTRLPVIASASYAYIIPITSII 131
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2) HSP 1 Score: 50.8322 bits (120), Expect = 4.937e-11 Identity = 38/152 (25.00%), Postives = 64/152 (42.11%), Query Frame = 2 Query: 161 CQSSMITMT-GASHLMHDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHF-----------------ILERFALLFCIGVDWTFAAILTAAGAY 562 C ++ IT+ G + L+ + I+ IQ ++I+SS I +V+G G G L R+ P+ I P V ++GL F G I + + L+ + QY + N F + + F ++ I V W I T + Sbjct: 186 CNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYAR----NVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVF 333 HSP 2 Score: 37.3502 bits (85), Expect = 4.937e-11 Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1 Query: 19 MGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIN 174 +G ++I ++ F G+ TLLQT FG RLP + + AF P +I++ Sbjct: 129 VGDDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILS 180
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2) HSP 1 Score: 50.8322 bits (120), Expect = 4.937e-11 Identity = 36/148 (24.32%), Postives = 63/148 (42.57%), Query Frame = 2 Query: 161 CQSSMITMT-GASHLMHDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLH-------------PNAHFILERFALLFCIGVDWTFAAILTAAGAY 562 C ++ IT+ G + L+ + I+ IQ ++I+SS I +V+G G G L R+ P+ I P V ++GL F G I + + L+ + QY + + + + F ++ I V W I T + Sbjct: 187 CNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKFQLFKMFPIILAILVSWLLCFIFTVTDVF 334 HSP 2 Score: 37.3502 bits (85), Expect = 4.937e-11 Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1 Query: 19 MGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIN 174 +G ++I ++ F G+ TLLQT FG RLP + + AF P +I++ Sbjct: 130 VGDDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILS 181
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 8.315e-11 Identity = 41/162 (25.31%), Postives = 69/162 (42.59%), Query Frame = 2 Query: 161 CQSSMITMT-GASHLMHDR--FRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHF-----------------ILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586 C ++ +++ G + L+H + IR IQ ++I+SS I +V+G G G L ++ P+ I P V ++GL F G I + + L+ + QY + N F + + F ++ I V W I T + PD TK Sbjct: 187 CNTTDVSVANGTAELLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYAR----NVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVF--PPDSTK 342 HSP 2 Score: 36.965 bits (84), Expect = 8.315e-11 Identity = 17/43 (39.53%), Postives = 27/43 (62.79%), Query Frame = 1 Query: 46 RVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIN 174 ++I ++ F G+ TLLQT FG RLP + + AF P +I++ Sbjct: 139 QLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILS 181 The following BLAST results are available for this feature:
BLAST of CN182030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182030 ID=CN182030; Name=CN182030; organism=Citrus sinensis; type=EST; length=588bpback to top |