CN182027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 46/169 (27.22%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 20 NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGST-LFSGYTDGVIRVWGI 514 N +VS S+D +V++W++ TL H+ V+ V+ + DGSL ASG DG++ +WD A G+ + +L D + + FSPN +Y L + + ++K+WD ++ + YC N+S G + SG D I +W + Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ------------------YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 47/169 (27.81%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 20 NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGST-LFSGYTDGVIRVWGI 514 N +VS S+D +V++W++ TL H+ V+ V+ + DGSL SG DG++ +WD A G+ + +L D + + FSPN +Y L + + ++K+WD ++ + N YC N+S G + SG D I VW + Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQ------------------GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 44 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 514 S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ NI TSL +S D + S D +RVW I Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR------------------GHTDNI--TSLTFSPDSGLIASASMDNSVRVWDI 539
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 51/158 (32.28%), Postives = 72/158 (45.57%), Query Frame = 2 Query: 38 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 +VS S D TVK+W+ S K R TL GHTG VN+V + D L SG D I +W L L++ A + +L + +R + C + + +IK WD+E K V L + +AD L SG DGV++VW Sbjct: 366 LVSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGVWEI----------------------AADHLRLISGAHDGVVKVW 499
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR61_DANRE (WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 53/164 (32.32%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 35 TIVSASWDRTVKVWNLSNCKLRA--TLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAATE-QSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 514 TIV+ S D VKVW S+ KL TL GH V +V +S +G++ AS D I LWDL GK++ S+DAG V + FSP+ ++ + + I+ +ES L + S+ +S DG L SG DG+I ++ I Sbjct: 34 TIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDT--------------------RGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 44/170 (25.88%), Postives = 82/170 (48.24%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D L SG D + +W+L+ GK L +L + C F+P + + + ++S++IWD+ + ++ L ++++++ DGS + S DG+ R+W Sbjct: 78 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 225
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 38 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWD 325 IVS S+D +VK+W + K TL+ H+ ++ V + +GSL SG DG+ +WD A G+ L +L + + + FSPN +Y L A + ++K+WD Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 51/173 (29.48%), Postives = 77/173 (44.51%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 514 V SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ TSL +S D + S D +RVW I Sbjct: 390 VDISPFSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR--------------------GHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: EIF3I_PICST (Eukaryotic translation initiation factor 3 subunit I OS=Pichia stipitis GN=TIF34 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 42/154 (27.27%), Postives = 68/154 (44.16%), Query Frame = 2 Query: 38 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVI 499 + S + D +W SN + TL GH G + ++ V PD LCA+GG D I LW + GK +++ ++ + + + FSP+ L A +Q + +V ++ D T WSA+G + SG+ DG I Sbjct: 25 LFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPDTHLCATGGGDLAIKLWKVETGKCVFTWESPSPVRRVAFSPDGSRLLAIADQ---VMGHIGTIVVYEINHDDESLTNQSTEPSLVIETPQDGAKATVAGWSANGEFIISGHDDGYI 175
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 47/159 (29.56%), Postives = 71/159 (44.65%), Query Frame = 2 Query: 41 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 VS DR ++W + + AGH VN P+ + A+G D + LWD+ G R+++ G IH+L FSPN R+ AT+ + +WD+ +V +LK + C SL +S DG L SG D +R+W Sbjct: 602 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGP-IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK-------------------GHTDTVC-SLRFSRDGEILASGSMDNTVRLW 739 The following BLAST results are available for this feature:
BLAST of CN182027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182027 ID=CN182027; Name=CN182027; organism=Citrus sinensis; type=EST; length=702bpback to top |