CN182027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 47/159 (29.56%), Postives = 71/159 (44.65%), Query Frame = 2 Query: 41 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 VS DR ++W + + AGH VN P+ + A+G D + LWD+ G R+++ G IH+L FSPN R+ AT+ + +WD+ +V +LK + C SL +S DG L SG D +R+W Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGP-IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK-------------------GHTDTVC-SLRFSRDGEILASGSMDNTVRLW 738
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 51 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 51 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 51 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 51 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 5 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVW 508 V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 51 VKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CN182027 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 38 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWD 325 IVS S+D +VK+W + K TL+ H+ ++ V +GSL SG DG+ +WD A G+ L +L + + + FSPN +Y L A + ++K+WD Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWD 236 The following BLAST results are available for this feature:
BLAST of CN182027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182027 ID=CN182027; Name=CN182027; organism=Citrus sinensis; type=EST; length=702bpback to top |