CN182021
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 352 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 352 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = -1 Query: 40 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDR 228 +TAE+ KSRIF+I WSPD A+VRSKM+YASS +RFK+EL+GIQ+E+QATD E+ LD KDR Sbjct: 75 LTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18 Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = -1 Query: 37 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 228 VTAE+ QKSRIF+I WSP +A+V+SKM+YASS +FK L+GIQVELQATD SE+ LD KDRA Sbjct: 75 VTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.331e-17 Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 352 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = -1 Query: 37 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 228 VT +NC+ S+IFFI WSP+ +R+R KM+YA+SK +R LDG+ ELQATDP+EMG D +DRA Sbjct: 66 VTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17 Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = -1 Query: 37 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 228 VT +NCQKS+IFFIAWSP +R+R+K++YA+SK +R LDG+ E+QATD SEMG DV + RA Sbjct: 79 VTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 142
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.127e-16 Identity = 36/65 (55.38%), Postives = 53/65 (81.54%), Query Frame = -1 Query: 34 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 228 V+ +NC+KS+IFFI+WSP +R+R+K IYA S+++F+ ELDG+ E+QATDP +M L+V + RAN Sbjct: 85 VSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149 The following BLAST results are available for this feature:
BLAST of CN182021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182021 ID=CN182021; Name=CN182021; organism=Citrus sinensis; type=EST; length=558bpback to top |