CN182021
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.510e-16 Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = -1 Query: 34 KSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 207 +S+IFF++WSP A VRSKM+YASS + FK+ELDG+Q++LQATDPSE+ LDV KD + Sbjct: 93 RSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.627e-15 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.625e-15 Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVL 71
BLAST of CN182021 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.183e-15 Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 346 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 558 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71 The following BLAST results are available for this feature:
BLAST of CN182021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182021 ID=CN182021; Name=CN182021; organism=Citrus sinensis; type=EST; length=558bpback to top |