CN182020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 34/65 (52.31%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 V+ +NC+KS+IFFI+WSP + +R+K IYA +++F+ ELDG+ E+QATDP +M L+V + RAN Sbjct: 80 VSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 499 RIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 +I FIAWSP TA++R KMIY+S+KDRFKRELDGIQVE ATD +++ LD + R N Sbjct: 78 KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ACTP_ACACA (Actophorin OS=Acanthamoeba castellanii PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 1 Query: 490 QKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 663 Q+++I FI W+PD+A ++SKM+Y S+KD K++L GIQVE+QATD +E+ D +RA Sbjct: 76 QRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERA 133 The following BLAST results are available for this feature:
BLAST of CN182020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182020 ID=CN182020; Name=CN182020; organism=Citrus sinensis; type=EST; length=698bpback to top |