CN182020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -3 Query: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 126 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36 The following BLAST results are available for this feature:
BLAST of CN182020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182020 ID=CN182020; Name=CN182020; organism=Citrus sinensis; type=EST; length=698bpback to top |