CN182020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = -3 Query: 355 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 471 PDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = -3 Query: 355 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 468 DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 39 DQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.848e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 VTAENCQKS+IFFIAWSPDTA+VR KMIYASSKDRFKRELDGIQVELQATDP+EMGLDVFK R N Sbjct: 73 VTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27 Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = -3 Query: 127 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 354 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = -3 Query: 355 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 468 DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 39 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 VTAENCQKSRIFFIAW PDTARVRSKMIYASSKDRFKRELDGIQVELQA DP+EMGLDV + RAN Sbjct: 75 VTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = -3 Query: 133 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 321 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3 Query: 361 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 471 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 27 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26 Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 VT ENCQKS+IFFIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVELQATDP+E+GLDV + RAN Sbjct: 75 VTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 666 VTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVF+ RAN Sbjct: 75 VTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139
BLAST of CN182020 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26 Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 472 VTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN*IK 675 +T EN QKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EMGLDVF+ RA I+ Sbjct: 75 MTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGIE 142 The following BLAST results are available for this feature:
BLAST of CN182020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182020 ID=CN182020; Name=CN182020; organism=Citrus sinensis; type=EST; length=698bpback to top |