CN188846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188846 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15 Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 103 SRKGAYRLQAVRAQAGGENKDTSVDVHVNSGNQGTQAERRPRRTALDIL-----PFGLMDPSF-----PT--RTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEEAGGDPS----WSGASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTNVERK 669 +R +L A + GE +D ++ V+ + + + PRR L G P+ PT T+ Q + M+R+ ++ P + GQV KE+++ K+R+++PGL L IKG+H+AEE G P WS S+ Y+T L LPD+ + + +KAELKNGVL + IP+T +K Sbjct: 31 NRHNPMKLNRFMATSAGEQED-KMNTEVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFNVNPFQLM----GQV------KEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKK 224
BLAST of CN188846 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14 Identity = 46/145 (31.72%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 259 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEEAGGDPSWSGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTNVERKVIDVQIL 690 + DP TR++ Q+++ MD+L+E+ R G G +R WD++E+E ++++ DMPGL L+IK E E + Y +R++L N K D +KAE+KNGVL +++PK E K Q++ Sbjct: 67 VFDPFRATRSVGQLMNLMDQLMENPFMAASR---GSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQR------RRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVM 202
BLAST of CN188846 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12 Identity = 61/197 (30.96%), Postives = 87/197 (44.16%), Query Frame = 1 Query: 94 PATSRKGAYRLQAVRAQAGGENKDTSVDVHVNSGNQGTQAE----RRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEEAGGDPSWSGASFSSYDTRLQL-PDNCEKDKVKAELKNGVLYISIPKTNVERK 669 PA A R AV + N + H + RRP R A +P D + Q L + L++D GR+ G +R W+ KE E + +R DMPGL LVIKGE +EAG D GA+ + Y R++L P+ D++KAE+KNGVL + +PK E++ Sbjct: 24 PAQGAASALRPVAVAGGSRAYNTGAQLRRHERDESDDDSGRGYDTRRPTRDAT--MPAFFSDVFRDPFSAPQSLGRLLSLMDDLATPAGRA---GAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGE-KEAGED---EGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQR 211 The following BLAST results are available for this feature:
BLAST of CN188846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188846 ID=CN188846; Name=CN188846; organism=Citrus sinensis; type=EST; length=760bpback to top |