CN182010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_XENTR (Elongation factor 1-beta OS=Xenopus tropicalis GN=eef1b PE=2 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18 Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+QMEGL+WGASKL PVGYGIKKLQI Sbjct: 145 ILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQI 192
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_XENLA (Elongation factor 1-beta OS=Xenopus laevis GN=eef1b PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.224e-17 Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE +RS+QM+GLLWG+SKL PVGYGIKKLQI Sbjct: 144 ILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQI 191
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D_XENLA (Elongation factor 1-delta OS=Xenopus laevis GN=eef1d PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17 Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VR+VQM+GL+WG+SKL PVGYGIKKLQI Sbjct: 182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQI 229
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B2_BOMMO (Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17 Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIM 559 +LLDVKPWDDETDMK++E VR+++MEGLLWGASKL PVGYGI KLQIM Sbjct: 139 ILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIM 187
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_MOUSE (Elongation factor 1-beta OS=Mus musculus GN=Eef1b PE=1 SV=5) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI Sbjct: 142 ILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQI 189
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_HUMAN (Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQI 189
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_DROME (Probable elongation factor 1-beta OS=Drosophila melanogaster GN=Ef1beta PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIM 559 VLLDVKPWDDETDMK++E VR+++M+GLLWGASKL PVGYGI KLQIM Sbjct: 139 VLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIM 187 HSP 2 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHI 178 +AF +V + GLK+L+ +L SYI+GY SK D++V+ AL KAPS++ VNV+RWY+HI Sbjct: 1 MAFGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHI 59
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_CHICK (Elongation factor 1-beta OS=Gallus gallus GN=EEF1B PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQI 189
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_BOVIN (Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQI 189
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_RABIT (Elongation factor 1-beta OS=Oryctolagus cuniculus GN=EEF1B PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.072e-17 Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQI 556 +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI Sbjct: 142 ILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQI 189 The following BLAST results are available for this feature:
BLAST of CN182010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182010 ID=CN182010; Name=CN182010; organism=Citrus sinensis; type=EST; length=614bpback to top |