CN182005

Overview
NameCN182005
Unique NameCN182005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 3
Query:    3 GEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            G+ TVR LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  245 GKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29
Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 3
Query:    3 GEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            G  TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L R KAN +A+LG Y G+   G  AAESL V  + Y
Sbjct:  253 GLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.218e-28
Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  260 TVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  260 TVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  253 TVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  253 TVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  253 TVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  253 TVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  253 TVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
The following BLAST results are available for this feature:
BLAST of CN182005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_DICDI4.186e-2958.26Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF2_CAEEL4.186e-2957.39Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOA_RAT1.218e-2856.25Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_PLAFA7.895e-2859.82Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF77.895e-2859.82Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOA_RABIT1.031e-2755.36Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB1.031e-2755.36Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR1.031e-2755.36Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_MOUSE1.031e-2755.36Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.031e-2755.36Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182005 ID=CN182005; Name=CN182005; organism=Citrus sinensis; type=EST; length=623bp
GAGGTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCTGCAGCAGTT
CCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCG
CAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCATGGTCACTTT
CCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCATGGGCT
GGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTG
CAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATGCCCAGC
TTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAATACTAA
GCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAGAGTAAA
TGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTTAGGGCT
TTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTG
GTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTTTGTTTT
TTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGTCACATA
ATTGATAATGTTTTCTTGTGCTT
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