CN182005

Overview
NameCN182005
Unique NameCN182005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26
Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26
Identity = 61/112 (54.46%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            ++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  278 DYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26
Identity = 59/112 (52.68%), Postives = 76/112 (67.86%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  253 TVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26
Identity = 62/112 (55.36%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV  L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  253 TVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 3
Query:    3 GEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            G  TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  246 GFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            T+ AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  253 TLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.317e-26
Identity = 63/114 (55.26%), Postives = 76/114 (66.67%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  246 EYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.317e-26
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of CN182005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_PANTR1.140e-2650.89Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_BOVIN1.140e-2654.46Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALFC_ORYSJ1.489e-2654.39Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF2_LAMJA1.945e-2652.68Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_CHICK1.945e-2655.36Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF2_PLABA2.540e-2656.52Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALF1_LAMJA2.540e-2653.57Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_MACFA2.540e-2650.89Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALFC1_PEA3.317e-2655.26Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALDOC_HUMAN3.317e-2650.89Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182005 ID=CN182005; Name=CN182005; organism=Citrus sinensis; type=EST; length=623bp
GAGGTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCTGCAGCAGTT
CCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCG
CAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCATGGTCACTTT
CCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCATGGGCT
GGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTG
CAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATGCCCAGC
TTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAATACTAA
GCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAGAGTAAA
TGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTTAGGGCT
TTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTG
GTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTTTGTTTT
TTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGTCACATA
ATTGATAATGTTTTCTTGTGCTT
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