CN182005

Overview
NameCN182005
Unique NameCN182005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.332e-26
Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 3
Query:    9 HTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  290 YTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 5.658e-26
Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 117.087 bits (292), Expect = 7.390e-26
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY-KGDAQLGEGAAESLHVKDYKY 347
            TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L R KAN +A  G Y  G A  G G   SL V ++ Y
Sbjct:  252 TVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSG---SLFVANHAY 361          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 7.390e-26
Identity = 60/112 (53.57%), Postives = 70/112 (62.50%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y         + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 9.651e-26
Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 347
            TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  253 TVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  253 TVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25
Identity = 60/113 (53.10%), Postives = 74/113 (65.49%), Query Frame = 3
Query:    9 HTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  289 YTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   26 TVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25
Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
The following BLAST results are available for this feature:
BLAST of CN182005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC1_ARATH4.332e-2654.87Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDOB_MOUSE5.658e-2652.68Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALF_DROME7.390e-2655.75Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOB_SHEEP7.390e-2653.57Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_RABIT9.651e-2652.68Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALF_SCHMA1.260e-2553.51Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_SPAAU1.260e-2550.00Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALFC2_ARATH2.150e-2553.10Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALDOC_CHICK2.150e-2550.89Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOB_HUMAN2.150e-2552.68Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182005 ID=CN182005; Name=CN182005; organism=Citrus sinensis; type=EST; length=623bp
GAGGTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCTGCAGCAGTT
CCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCG
CAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCATGGTCACTTT
CCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCATGGGCT
GGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTG
CAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATGCCCAGC
TTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAATACTAA
GCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAGAGTAAA
TGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTTAGGGCT
TTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTG
GTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTTTGTTTT
TTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGTCACATA
ATTGATAATGTTTTCTTGTGCTT
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