CN182005

Overview
NameCN182005
Unique NameCN182005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20
Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 212
            TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   34 TVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 290
            E TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  240 ESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.325e-18
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 290
            E TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  240 ESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 290
            E TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  240 ESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.674e-18
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 290
            E TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  240 ESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  264 EYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 308
            ++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  286 DYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 242
            T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  244 TLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN182005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_LYMST6.059e-2068.66Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XYLFA1.949e-1851.04Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC3.325e-1851.04Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT5.671e-1850.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP9.674e-1850.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE1.183e-1543.86Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALFC_SPIOL1.544e-1545.54Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_ENCCU6.489e-1446.75Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182005 ID=CN182005; Name=CN182005; organism=Citrus sinensis; type=EST; length=623bp
GAGGTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCTGCAGCAGTT
CCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCG
CAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCATGGTCACTTT
CCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCATGGGCT
GGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTG
CAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATGCCCAGC
TTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAATACTAA
GCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAGAGTAAA
TGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTTAGGGCT
TTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTG
GTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTTTGTTTT
TTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGTCACATA
ATTGATAATGTTTTCTTGTGCTT
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