CX300703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEF5 (Regulator of ribonuclease activity A OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rraA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GCIRDVD I D+GV+ALASHPMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 79 LAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_HALHL (Regulator of ribonuclease activity A OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rraA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19 Identity = 37/84 (44.05%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 8 RIRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 R+ + NGW+G ++ GC+RD E+ D GV+AL +HP+K+ KKG+GE+ V +T G I G+WLYAD DG++++ EL++ Sbjct: 81 RLAELGRENGWSGAIIYGCVRDSAELAQIDFGVQALNTHPLKSQKKGLGERDVSVTFAGVTIQSGDWLYADEDGVVVASRELTL 164
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEP1 (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rraA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK +K+GIG+ +V +T G GE++YAD +G+L+S + L + Sbjct: 79 LAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEE4 (Regulator of ribonuclease activity A OS=Pseudomonas entomophila (strain L48) GN=rraA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.254e-18 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 79 LAEKAAKNGWEGLVIYGCVRDVDVLVQTDVGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPK (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain KT2440) GN=rraA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.638e-18 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK +K+GIG+ +V +T G GE++YAD +G+L+S L + Sbjct: 79 LAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPKPLKM 161
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_HAHCH (Regulator of ribonuclease activity A OS=Hahella chejuensis (strain KCTC 2396) GN=rraA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.140e-18 Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW GI++ GCIRDVD I D+GV+AL +HPMK +K+GIG+ + IT GG G ++YAD +G+++S LS+ Sbjct: 78 LAEKAAANGWEGIIIYGCIRDVDVIRQTDLGVQALGTHPMKTDKRGIGDLNADITFGGVTFKPGHYVYADNNGVIVSPEPLSM 160
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPG (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain GB-1) GN=rraA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.650e-18 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK +K+GIG+ +V + G GE++YAD +G+L+S + L + Sbjct: 79 LAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRGIGDLNVVVAFAGVTFRPGEYVYADNNGVLVSPSPLEM 161
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSE14 (Regulator of ribonuclease activity A OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rraA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.650e-18 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A +GW G+++ GCIRDVD I D+GV+ALASHP K K+GIG+ +V +T GG GE+LYAD +G++IS + L++ Sbjct: 80 LAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKTEKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 162
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_BURXL (Regulator of ribonuclease activity A OS=Burkholderia xenovorans (strain LB400) GN=rraA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.650e-18 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 23 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 253 AQ NGWAGIV+NGC+RD E+N ++G+ ALA+ P + K G GE+ V + + G + GEW+YAD+DG+L++ A L Sbjct: 87 AQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163
BLAST of CX300703 vs. ExPASy Swiss-Prot
Match: RRAA_PSEPW (Regulator of ribonuclease activity A OS=Pseudomonas putida (strain W619) GN=rraA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.225e-18 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 11 IRHEAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 259 + +A NGW G+V+ GC+RDVD + +GV+ALASHPMK +K+GIG+ +V +T G GE++YAD +G+++S + L + Sbjct: 79 LAEKAAKNGWEGLVIYGCVRDVDVLIQTSVGVQALASHPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLEM 161 The following BLAST results are available for this feature:
BLAST of CX300703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300703 ID=CX300703; Name=CX300703; organism=Citrus sinensis; type=EST; length=401bpback to top |