CN181991

Overview
NameCN181991
Unique NameCN181991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15
Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  275 ECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            E F     + ++  L+  AGI GLLFGYDTGVISGAL  +  D   V   +  +E I S              W+ D  GR+  +L AD +F +G+VIMAA+ N   ++ GR  VG G+G+ S+  P
Sbjct:   70 EGFEAEKISSWIWVLSAVAGISGLLFGYDTGVISGALAVLGSDLGHV-LSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVP 195          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15
Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            N + L+ A  A I  ++FGYDTGV+SGA+++I +D K+ D +  +   I+++               +D  GRR +I++A  LF +G+++M   PN   L++GR   GLGVG A M +P
Sbjct:   14 NRFALQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRT---SDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAP 129          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.250e-14
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  323 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            F   +GGLL+GYDTGVISGALL+I +D   +   TL +  +VSM +             +DR+GRR  + V   +F +GA+  A +   G LI  RV +GL VG ++   P
Sbjct:   12 FFGALGGLLYGYDTGVISGALLFINND---IPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVP 119          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +V  LAF+AGIGGLLFGYDTGVISGAL+ I       +     +E I S               + D FGR+  I +A  +  VG+++   A +   +I GR  +G GVG+AS+  P
Sbjct:   86 WVWVLAFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIP 202          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTS 652
            +V+ ++ +AG+GGLL+GYDT VISGA+ +++D +        ++  ++S  +           +++DRFGRR  ++ A  LF + A++ A + +   LI  R+  GLG+GM S  S
Sbjct:   22 FVILISCAAGLGGLLYGYDTAVISGAIGFLKDLYSL---SPFMEGLVISSIMIGGVVGVGISGFLSDRFGRRKILMTAALLFAISAIVSALSQDVSTLIIARIIGGLGIGMGSSLS 134          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14
Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 2
Query:  299 NPYVLRLAFS----AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            NP++ + AF     A I  ++FGYDTGV+SGA ++IRDD K  D +  +   I+++               +D  GRR +I ++  +F VG+V+M   PN   L+ GR   G+GVG A M +P
Sbjct:   15 NPHMNKFAFGCAIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKT---SDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAP 134          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.456e-14
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  323 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            F   +GGLLFGYDTGVISGA+L+I+   K ++  +  Q  +VS  +             +DRFGRR  +L++  +FFVGA+  A +P    LI  R+ +G+ VG AS   P
Sbjct:   11 FFGALGGLLFGYDTGVISGAILFIQ---KQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIP 118          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.613e-13
Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            L F   +GG L+GYDTGVISGA+L+++   K +      +  +VS  +            + DRFGR+ +I+ A  LF +G + +A APN G ++  R+ +GL VG ++   P
Sbjct:    9 LYFFGALGGALYGYDTGVISGAILFMK---KELGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVP 118          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++    LF +G++  A A +   LI  RV +G+ VG+AS T+P
Sbjct:   25 VSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAP 134          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++    LF +G++  A A +   LI  RV +G+ VG+AS T+P
Sbjct:   25 VSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAP 134          
The following BLAST results are available for this feature:
BLAST of CN181991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ITR2_SCHPO1.723e-1538.58Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
PLT6_ARATH6.548e-1536.13Probable polyol transporter 6 OS=Arabidopsis thali... [more]
CSBC_BACSU3.250e-1439.64Probable metabolite transport protein csbC OS=Baci... [more]
ITR1_SCHPO4.244e-1439.32Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
ARAE_BACSU4.244e-1433.62Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
PLT3_ARATH5.543e-1436.59Probable polyol transporter 3 OS=Arabidopsis thali... [more]
XYLT_LACBR9.456e-1440.54D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
YWTG_BACSU1.613e-1335.40Putative metabolite transport protein ywtG OS=Baci... [more]
ARAE_ECOLI2.751e-1338.05Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO572.751e-1338.05Arabinose-proton symporter OS=Escherichia coli O15... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181991 ID=CN181991; Name=CN181991; organism=Citrus sinensis; type=EST; length=656bp
GAGGCTTTCCTTCACTCACTTTCTTTCTCCCCCACCCCCAGTCCATTTTC
CCGGAAAATTTACTCACTATCACTATCATCATCATCACTCCCTTATATAG
TTATTTATAGTCCAAGTCCAACCACACCAAACCATTTTCTTGCCAAAATA
AAGAAAACAAACTCCTAAATTGTATATCTTTTAACAGATATTAATTTGTA
AAAAAAAAAAAAAAGGCCTGAAAATGGAGGGAGCAGTACATGGAGGAGGG
ACGACAGATGCGTCAGCGTTTCGAGAATGCTTCTCTTTGTCTTGGAAAAA
TCCCTACGTTCTTCGACTTGCTTTCTCTGCTGGAATTGGCGGCCTTCTCT
TTGGCTACGACACTGGAGTCATATCAGGCGCGCTACTTTATATCAGAGAT
GACTTCAAATCCGTCGATAGAAAGACTTTACTGCAGGAAAGCATAGTTAG
CATGGCTGTTGCTGGAGCAATCATTGGAGCTGCAATCGGTGGATGGATGA
ATGATCGCTTTGGAAGGAGAACTTCAATCCTTGTTGCAGATTTCCTGTTC
TTCGTTGGTGCTGTGATCATGGCTGCTGCTCCTAACCCTGGTGCCCTTAT
CACTGGACGAGTATTTGTAGGACTTGGTGTGGGAATGGCATCAATGACAT
CCCCGC
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