CN181991

Overview
NameCN181991
Unique NameCN181991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13
Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  296 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKT-LLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +N Y    A  A +  +L GYD GV+SGA++YI+ D K  D +  +L  S+   ++           W+    GRR +I++A  +FF GA++M  +PN   L+ GR   G+GVG A M +P
Sbjct:   32 RNNYAFACAILASMTSILLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWI----GRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAP 148          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            ++ +A + GLLFG D GVI+GAL +I D F    R   LQE +VS  +           W++ R GR+ S++V   LF  G+V  A A +   L+  R+ +G+ VG+AS T+P
Sbjct:   25 VSIAAAVAGLLFGLDIGVIAGALPFITDHFVLSSR---LQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAP 134          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 2
Query:  305 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            YV+  AF A +  +L GYD GV+SGA+L+I+ D K  + +T   E ++                 +D  GR+ ++ +A  +F  GA +MA AP+   L+ GR   G+G+G+  M +P
Sbjct:   54 YVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQT---EVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAP 167          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12
Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLL---QESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +P+++ L F A I G +FGYDTG IS AL+ I  D   +D K L    +E I +                 D FGRR  ++ ++ +F +GA++   A     +  GR+ +G GVG+ S+ SP
Sbjct:  106 SPFIITLTFVASISGFMFGYDTGYISSALISINRD---LDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISP 224          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 2
Query:  302 PYVLRLAFS-----AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXW-MNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            PY L    S     A IGGLLFGYDTGVISG LL ++ +  S+   T +Q+ +++ +            + + DR+GRR ++ +   +F + A+ MA A     LI GR+ VG+ VG+++   P
Sbjct:   32 PYALTFKTSLIFVGATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVP 155          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 2
Query:  296 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            ++ +    A  A +  ++ GYD GV+SGA ++I+DD K  D +  +   I+++               +D  GRR +I++A F FF GA++M  A N   ++ GR   G+GVG A M +P
Sbjct:   22 RSRFAFACAILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRT---SDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAP 138          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 36/113 (31.86%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  317 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +A +A +G LL G+D   I+GA+LYI+ +F +++    ++  IV+M++            + D  GRR  ++++  L+FVG+++M  +PN   L+ GR+  G GVG+     P
Sbjct:    7 VAIAAAVGNLLQGWDNATIAGAVLYIKKEF-NLESNPSVEGLIVAMSLIGATLITTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVP 118          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 38/122 (31.15%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  299 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLL---QESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +P+++ L F A I G +FGYDTG IS AL+ I  D   +D K L    +E + +                 D FGR+  ++ ++ +F +GA++  +A     +  GR+ +G GVG+ S+ +P
Sbjct:   83 SPFIITLTFVASISGFMFGYDTGYISSALISIGTD---LDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAP 201          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: GTR10_XENLA (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.363e-11
Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  320 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASM 646
            A S+ +GGL+FGY+ G+ISGALL ++  F+        QE++VS  +           ++ DR GRRTSI+ ++ +   G++I+ A  +   L+ GRV VG  + ++SM
Sbjct:   12 ATSSLLGGLIFGYELGIISGALLMLKTVFQLT---CFEQEALVSAVLFGALLASLIGGFIIDRSGRRTSIMGSNLVVLAGSIILIATSSFWWLVVGRVTVGFAISISSM 117          
BLAST of CN181991 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11
Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  296 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYI-RDDFKSVDRKTLLQESIVSMAVXXXXXXXXXXXWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSP 655
            +N  +  +  SA  GGLLFGYDTGVI+GAL ++ R D   +D   + +  + S+ +            + DR+GRR  IL   FLFF+ ++  A APN   +   R  +GL VG AS   P
Sbjct:    7 RNRRLKLIMISATFGGLLFGYDTGVINGALPFMARPD--QLDLTPVTEGLVTSILLLGAAFGALLCGRLADRYGRRKMILNLSFLFFLASLGTALAPNVFIMAVFRFLLGLAVGGASAMVP 125          
The following BLAST results are available for this feature:
BLAST of CN181991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
PLT5_ARATH3.593e-1335.54Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
ARAE_KLEOX4.693e-1338.05Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
PLT4_ARATH1.045e-1233.33Probable polyol transporter 4 OS=Arabidopsis thali... [more]
ITR2_YEAST2.329e-1233.61Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
YD387_YEAST1.510e-1135.48Probable metabolite transport protein YDR387C OS=S... [more]
PLT2_ARATH2.575e-1132.50Putative polyol transporter 2 OS=Arabidopsis thali... [more]
MSSP2_ARATH2.575e-1131.86Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
ITR1_YEAST2.575e-1131.15Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
GTR10_XENLA3.363e-1135.78Solute carrier family 2, facilitated glucose trans... [more]
YNCC_BACSU4.392e-1137.19Putative metabolite transport protein yncC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181991 ID=CN181991; Name=CN181991; organism=Citrus sinensis; type=EST; length=656bp
GAGGCTTTCCTTCACTCACTTTCTTTCTCCCCCACCCCCAGTCCATTTTC
CCGGAAAATTTACTCACTATCACTATCATCATCATCACTCCCTTATATAG
TTATTTATAGTCCAAGTCCAACCACACCAAACCATTTTCTTGCCAAAATA
AAGAAAACAAACTCCTAAATTGTATATCTTTTAACAGATATTAATTTGTA
AAAAAAAAAAAAAAGGCCTGAAAATGGAGGGAGCAGTACATGGAGGAGGG
ACGACAGATGCGTCAGCGTTTCGAGAATGCTTCTCTTTGTCTTGGAAAAA
TCCCTACGTTCTTCGACTTGCTTTCTCTGCTGGAATTGGCGGCCTTCTCT
TTGGCTACGACACTGGAGTCATATCAGGCGCGCTACTTTATATCAGAGAT
GACTTCAAATCCGTCGATAGAAAGACTTTACTGCAGGAAAGCATAGTTAG
CATGGCTGTTGCTGGAGCAATCATTGGAGCTGCAATCGGTGGATGGATGA
ATGATCGCTTTGGAAGGAGAACTTCAATCCTTGTTGCAGATTTCCTGTTC
TTCGTTGGTGCTGTGATCATGGCTGCTGCTCCTAACCCTGGTGCCCTTAT
CACTGGACGAGTATTTGTAGGACTTGGTGTGGGAATGGCATCAATGACAT
CCCCGC
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