FC921837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.304e-12 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 75 TPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 T GPVLIH VT+KGKGY PAE A D+ HGV KFDP TG+Q K+ + YT Sbjct: 276 TTGPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPNYT 326 HSP 2 Score: 23.483 bits (49), Expect = 3.304e-12 Identity = 8/21 (38.10%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GP+D H++E L+ + R Sbjct: 253 YVGPIDGHDMEALLQTLRAAR 273
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 7.233e-12 Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 3 Query: 42 LPSFRE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 LP + GP+L+H VT+KGKGY PA AA+D+ H V FD TG Q K K+ +YT Sbjct: 263 LPVLKNVRDFKETGPILVHVVTQKGKGYAPAAAASDKYHSVNTFDVVTGVQTKPKANAPSYT 324 HSP 2 Score: 28.8758 bits (63), Expect = 7.233e-12 Identity = 9/22 (40.91%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN++ L+ + + VR+ Sbjct: 250 YVGPIDGHNLDHLLPVLKNVRD 271
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 7.234e-12 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 66 KMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 K GPVLIHAVT KGKGY PAE + D HGV KFD TG+Q K+ +YT Sbjct: 269 KARATGPVLIHAVTVKGKGYSPAELSDDCYHGVAKFDVATGQQKKSAPNAPSYT 322 HSP 2 Score: 28.1054 bits (61), Expect = 7.234e-12 Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRENA 73 Y+GPVD H++E+L+T + + A Sbjct: 249 YIGPVDGHDMEELLTTLRAAKARA 272
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.391e-12 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 3 Query: 84 PVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 PVL+H VT+KGKGY PAE AAD++H VVKFD TG+Q K +YT Sbjct: 274 PVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGPPSYT 321 HSP 2 Score: 25.409 bits (54), Expect = 9.391e-12 Identity = 7/21 (33.33%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GP+D H+++ LV++ + + Sbjct: 248 YIGPIDGHDMDALVSVLKNAK 268
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.391e-12 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 3 Query: 84 PVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 PVL+H VT+KGKGY PAE AAD++H VVKFD TG+Q K +YT Sbjct: 274 PVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGPPSYT 321 HSP 2 Score: 25.409 bits (54), Expect = 9.391e-12 Identity = 7/21 (33.33%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GP+D H+++ LV++ + + Sbjct: 248 YIGPIDGHDMDALVSVLKNAK 268
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.219e-11 Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 66 KMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 K GP+LIHAVT+KGKGY PAE A D+ H KFD TG+Q K S +YT Sbjct: 274 KARAAGPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPSNAPSYT 327 HSP 2 Score: 26.5646 bits (57), Expect = 1.219e-11 Identity = 8/24 (33.33%), Postives = 17/24 (70.83%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRENA 73 Y+GP+D H+++ L+ + + V+ A Sbjct: 254 YIGPIDGHDMDQLLPVLRTVKARA 277
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.054e-11 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVLIH T KGKGY PAE A D++HGV KFD +TGKQ K+ YT Sbjct: 276 GPVLIHVCTTKGKGYAPAEGAEDKLHGVSKFDIETGKQKKSIPNAPNYT 324 HSP 2 Score: 25.0238 bits (53), Expect = 2.054e-11 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRENA 73 Y+GPVD H++ +LV + R A Sbjct: 251 YIGPVDGHDMAELVETLRVTRARA 274
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.666e-11 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 66 KMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 K GPVLIH T KGKGY PAE +AD+ HGV KFD TG Q K K+ +YT Sbjct: 272 KARATGPVLIHCCTVKGKGYAPAEGSADKYHGVSKFDVGTGVQAKAKANAPSYT 325 HSP 2 Score: 24.2534 bits (51), Expect = 2.666e-11 Identity = 7/24 (29.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRENA 73 Y+GP+D H++ L+++ + + A Sbjct: 252 YIGPIDGHDMAQLLSVLRGAKARA 275
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.461e-11 Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 66 KMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 K GP++IHA+T+KGKGY PAE A D+ H KFD TG+Q K S +YT Sbjct: 274 KARATGPIMIHALTKKGKGYAPAETARDKGHATAKFDVLTGQQTKAPSNAPSYT 327 HSP 2 Score: 26.1794 bits (56), Expect = 3.461e-11 Identity = 8/24 (33.33%), Postives = 17/24 (70.83%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRENA 73 Y+GP+D H+++ L+ + + V+ A Sbjct: 254 YIGPIDGHDLDQLLPLLRTVKARA 277
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 4.491e-11 Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GP+L+H VT KG+GY PAEAA D+ H V + D +GKQ K +YT Sbjct: 275 GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPSYT 323 HSP 2 Score: 30.8018 bits (68), Expect = 4.491e-11 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GPVD HN++ L+ + + VR+ Sbjct: 250 YVGPVDGHNLDQLIPVLENVRD 271 The following BLAST results are available for this feature:
BLAST of FC921837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921837 ID=FC921837; Name=FC921837; organism=Citrus sinensis; type=EST; length=229bpback to top |