CN181986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 4.783e-61 Identity = 112/174 (64.37%), Postives = 135/174 (77.59%), Query Frame = -2 Query: 149 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 670 +EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQT E ++ G LK Sbjct: 212 NEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 6.246e-61 Identity = 109/174 (62.64%), Postives = 137/174 (78.74%), Query Frame = -2 Query: 149 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 670 DEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E +A T+FD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++LK+IDTSSKFGHG FQT +EK + G LK Sbjct: 213 DEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTDFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.392e-60 Identity = 111/174 (63.79%), Postives = 132/174 (75.86%), Query Frame = -2 Query: 149 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 670 DEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A ES S TEFDRT+K I PMGGF YG V D++L+KG G KKR+VT+R+SL TSR A E + LK+IDT+SKFG GRFQT EK + G LK Sbjct: 212 DEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.288e-60 Identity = 109/174 (62.64%), Postives = 135/174 (77.59%), Query Frame = -2 Query: 149 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 670 DE+ID+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E SA TE D T+K ITPMGGF YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++LK+IDTSS+FGHG FQT EK ++ G LK Sbjct: 213 DEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.147e-57 Identity = 105/175 (60.00%), Postives = 135/175 (77.14%), Query Frame = -2 Query: 146 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 670 +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G S + TEFD TEK I+PMGGFPHYG V D++++KG VG +KRVVTLR+SLL+Q A EE+ +KF+DTSSK GHGRFQT+ EK +YG KA Sbjct: 208 NENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---NIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_PIG (60S ribosomal protein L3 (Fragment) OS=Sus scrofa GN=RPL3 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.017e-39 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = -2 Query: 329 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLI 670 DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +F+VARAGQ GYHHRTE+NKKIYK+G+ ++ T++D ++K I P+G F HYG V D++++ Sbjct: 11 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32 Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = -2 Query: 209 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 667 E++DI+ VTKGKG +G V RWGV K +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ + + + +ITP GGFPHYGVV D+++I G G KR++ +R ++ R E ++ +I SK Sbjct: 212 ELLDIVAVTKGKGTQGPVKRWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGE------NGKLTLNGEKIEITPNGGFPHYGVVKNDFIMIAGTIPGAIKRIIRMRPAVRPPAKRPPAEAPQITYISRESK 358
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 63/153 (41.18%), Postives = 96/153 (62.75%), Query Frame = -2 Query: 209 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 667 E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + + + TE +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 217 ELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE-----NGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31 Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = -2 Query: 209 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 667 E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 214 ELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
BLAST of CN181986 vs. ExPASy Swiss-Prot
Match: RL3_PYRHO (50S ribosomal protein L3P OS=Pyrococcus horikoshii GN=rpl3p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.315e-31 Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = -2 Query: 209 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 667 E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 215 ELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361 The following BLAST results are available for this feature:
BLAST of CN181986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181986 ID=CN181986; Name=CN181986; organism=Citrus sinensis; type=EST; length=671bpback to top |