CN181984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO45 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: YDAB_BACSU (Putative acyl--CoA ligase ydaB OS=Bacillus subtilis GN=ydaB PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 43/149 (28.86%), Postives = 80/149 (53.69%), Query Frame = -2 Query: 125 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 571 E+ V + + +GY +N E TA+ + +NGW T K++I Y G V P ++E ++ P + + AVV +PD GE P A +V N + +E+D++ F ++ Y K+ + FV+ +PK++ GK+ + +L+++ Sbjct: 353 EIVVHTPFLFKGYEDNPEATAKVL-QNGWFRTGDSGYVDEDGFIFITGRYKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVKNGGQRITEEDVIAFCKERLSAY-KIPEVEFVNELPKNNLGKVKKDVLRNQ 499
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVLGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLI (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12) GN=caiC PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLC (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiC PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECODH (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12 / DH10B) GN=caiC PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOBW (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12 / BW2952) GN=caiC PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLU (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO7I (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ HP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFADRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_CITK8 (Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14 Identity = 44/150 (29.33%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TA+ ++ NGWLHT +IK G V+ ELE I+ HP ++D V+ + D E A VV+N +E++ F N+A +K L + +P++ SGKI+++ LK Sbjct: 368 EICIKGVPGKTIFKEYYARPEATAKALEANGWLHTGDSGYRDEEGFFYFVDRRCNMIKRGGENVSCIELENIISAHPKIQDIVVIGIHDSIRDEAIKAFVVLNEGETLTEEEFFAFCEQNMAKFKVPSFLEIRNDLPRNCSGKIIKKNLK 517 The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bpback to top |