CN181984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: FADK_ECOLI (Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadK PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 2.473e-14 Identity = 45/152 (29.61%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 110 RSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMN-PNAKESEDDIMDFVA-SNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 559 R V GY++ E TAR +D+ GW ++ K++I G ++ E+E ILL HP + DA VV++ DE GE A VV+ P+ S ++++ F + VA YK + ++ +P++ SGKI + +L+ ++ ++ Sbjct: 388 RGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRKDIMRRL 539
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALTI (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhi GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALSV (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella schwarzengrund (strain CVM19633) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALPK (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALPB (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALPA (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi A GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALNS (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella newport (strain SL254) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALEP (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALDC (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella dublin (strain CT_02021853) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALA4 (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella agona (strain SL483) GN=caiC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + YY E TAR ++ GWLHT +IK G V+ ELE I+ HP ++D VV + D E A +V+N SE + F +N+A +K + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517 The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bpback to top |