CN181984

Overview
NameCN181984
Unique NameCN181984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.068e-33
Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E TA TID  GWLHT                 +KELIK+KGFQV PAELE++L+ HPS+ DAAVV   D+ AGE+P A VV   ++  +E+ I +F++  V  YK++  +HF+  IPKS SGKI+RR L+ K+
Sbjct:  417 EICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELRAKL 566          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.821e-33
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R Q +M+GY N+E  TA TID  GWLHT                 +KELIKYKGFQV PAELE +L++HPS+ DAAVV   D  AGE+P A VV +     +E+ + +F+A  V  YK++  ++FV  IPKS SGKI+R+ L+ K+
Sbjct:  405 EICIRGQQIMKGYLNDEAATASTIDSEGWLHTGDVGYVDDDDEIFIVDRVKELIKYKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 554          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.379e-33
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            E+CVR   VMQGY+NN + T  TI K GWLHT                 +KELIKYKGFQ+APAELE +LL+HP + DA V+  PD +AGE+P A VV +P++  +E D+  F+   VA YK+++ + FV  +PKS SGKI+RR L
Sbjct:  399 EICVRGPNVMQGYFNNVQATEFTI-KQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAKAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILRRQL 543          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.181e-32
Identity = 73/154 (47.40%), Postives = 95/154 (61.69%), Query Frame = -2
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            EL +RS  VM+GY+ N+E TA TID  GWL T                 +KELIK  G+QVAPAELEA+LL HP + DAAV+ +PD +AG+ P A +V    +  SE +IM FVA  V+ YKK+R + F+  IPK+ SGKI+RR L      K+
Sbjct:  412 ELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTSKL 565          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = -2
Query:  116 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKDKMLE 571
            ELCVR   +M GY NN E T   IDK+GWLH+                 +K LIKYKG+QVAPAELE+ILL HP++ DA V  LPD++AGE+PAA VV+      +E +I+D+VAS V T KK+R  + FVD +PK  +GK+  R +++ +++
Sbjct:  389 ELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILIK 541          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.486e-32
Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL +R   VM+GY+ N E T  T+  +GWL T                 +KELIKYKG+QV PAELEA+LLTHP V D AV+  PD E G+ P A +V    +  SE ++M+FVA  VA YKKVR + FV  IPK+ SGKI+R+ L
Sbjct:  399 ELWIRGPYVMKGYFKNAEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAVIPFPDREVGQFPMAYIVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDL 544          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.995e-32
Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL +R   +M+GY  NE+ +A T+DK GWL T                 +KELIKYK +QV P ELE IL ++P V DAAVV  PDE+AGEIP A +V  P +  +E  I+DFVA  V  YKKVR + F++ IPK+ +GKI+RR L
Sbjct:  405 ELWLRGPVIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRREL 550          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.995e-32
Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R Q +M+ Y N+ E T+ TID+ GWLHT                 +KE+IK+KGFQV PAELE++L+ H S+ DAAVV   DE AGE+P A VV +     +E+D+ ++VA  V  YK++  + FV  IPKS SGKI+R+ LK K+
Sbjct:  411 EICIRGQQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 560          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.305e-31
Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = -2
Query:  119 GYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 538
            GY  ++E TA T+D  GWL T                 +KELIKYKG+QV PAELE IL +HP + DAAV+  PDEEAGE+P A +V  P +  +++ +MD+VA  VA YKKVR + FV  IPKS +GKI+RR L  + L
Sbjct:  396 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILQSHPGIADAAVIPYPDEEAGELPMAFIVRQPGSNITKEQVMDYVAKQVAPYKKVRRVAFVTAIPKSPAGKILRRELVQQAL 535          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31
Identity = 74/146 (50.68%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL +R   VM+GY  + E TA TI  +GWL T                 +KELIKYKG+QV PAELE IL + P + DAAVV  PDEEAG++P A VV  P A  +E  +M+ VA +VA YKKVR + FV+ IPKS +GKI+RR L
Sbjct:  442 ELWIRGPVVMKGYVGDPEATAATITPDGWLKTGDLCYFNEDGYLYVVDRLKELIKYKGYQVPPAELEHILQSRPEIADAAVVPYPDEEAGQLPMAFVVRQPGAYLTEQQVMNCVAKHVAPYKKVRRVAFVNAIPKSPAGKILRREL 587          
The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
4CL2_ORYSJ1.068e-3346.67Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa... [more]
4CL2_SOYBN1.821e-3347.334-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2[more]
4CLL1_ORYSJ2.379e-3349.324-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL2_ARATH1.181e-3247.404-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
LUCI_PHOPY1.542e-3247.06Luciferin 4-monooxygenase OS=Photinus pyralis PE=1... [more]
4CLL4_ORYSJ4.486e-3248.634-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CLL9_ARATH9.995e-3248.634-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
4CL3_ARATH9.995e-3246.004-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ... [more]
4CLL5_ORYSJ1.305e-3149.294-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
4CLL6_ORYSJ1.705e-3150.684-coumarate--CoA ligase-like 6 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bp
TATCGAAGGACACAAAGTTAACACATAGAGCGATGAATGTTAAGCATCCA
ACAACAAGTGATCAAAGGGGAGAAAATTAATAAGCCGGCTGCGTCAGATT
TCACTTTCGCATCTTCTCAAGCATCTTGTCTTTGAGAATCCTTCTCATTA
TTTTCCCAGAGTGAGACTTTGGGATGCCATCCACAAAGTGCAAGACTCTC
ACTTTCTTATAAGTTGCAACGTTGGAGGCCACGAAGTCCATAATATCATC
TTCACTTTCTTTGGCATTTGGGTTCATCACGACACAGGCGGCTGGGATTT
CCCCCGCCTCTTCATCAGGCAGCGACACAACCGCAGCATCTTCAACCGAG
GGATGAGTTAAAAGGATGGCTTCAAGCTCAGCCGGGGCTACTTGAAACCC
CTTGTACTTGATTAACTCTTTGATGCGATCAACAATAAAAATATCTCCGT
CATCATCTATGTATCCAATGTCACCGGTATGTAGCCACCCATTCTTGTCA
ATGGTCCTTGCAGTTTCCTCTTCATTGTTATAGTAACCTTGCATTACACA
TTGACTTCTGACGCAAAGCTCA
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